RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 GKAP1Q5VSY0 366 aaPredicted RBP4.1□□□□□ -1.75
HDDC2-207ENST00000608532 ARHGAP17Q68EM7 881 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 NCEH1Q6PIU2 408 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 RBMS3Q6XE24 437 aaKnown RBP4.1□□□□□ -1.75
HDDC2-207ENST00000608532 TMTC3Q6ZXV5 915 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 HIST3H2AQ7L7L0 130 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 TRPT1Q86TN4 253 aaKnown RBP4.1□□□□□ -1.75
HDDC2-207ENST00000608532 SLC38A9Q8NBW4 561 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 FCAMRQ8WWV6 532 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 ELMOD3Q96FG2 381 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 PRMT6Q96LA8 375 aaPredicted RBP4.1□□□□□ -1.75
HDDC2-207ENST00000608532 C17orf77Q96MU5 243 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 NUDCD1Q96RS6 583 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 SEMA6AQ9H2E6 1030 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 AASSQ9UDR5 926 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 CORO1CQ9ULV4 474 aaPredicted RBP4.1□□□□□ -1.75
HDDC2-207ENST00000608532 MTMR6Q9Y217 621 aa4.1□□□□□ -1.75
HDDC2-207ENST00000608532 LIPT2A6NK58 231 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 C15orf62A8K5M9 175 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 TMEM189-UBE2V1I3L0A0 370 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 J3KRW8 73 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 OGG1O15527 345 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 DAB1O75553 588 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 RARGP13631 454 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 GNAZP19086 355 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 PMP22Q01453 160 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 UBE2V1Q13404 147 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 EIF4A2Q14240 407 aaKnown RBP4.09□□□□□ -1.75
HDDC2-207ENST00000608532 SOWAHCQ53LP3 525 aaPredicted RBP4.09□□□□□ -1.75
HDDC2-207ENST00000608532 NDUFAF5Q5TEU4 345 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 TMEM198Q66K66 360 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 PXKQ7Z7A4 578 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 GCSAMQ8N6F7 178 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 HJURPQ8NCD3 748 aaPredicted RBP4.09□□□□□ -1.75
HDDC2-207ENST00000608532 ZNF473Q8WTR7 871 aaKnown RBP4.09□□□□□ -1.75
HDDC2-207ENST00000608532 LGALS12Q96DT0 336 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 WBP1Q96G27 269 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 C7orf26Q96N11 449 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 GAD1Q99259 594 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 NCAPGQ9BPX3 1015 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 RAD21L1Q9H4I0 556 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 SETD4Q9NVD3 440 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 INTS10Q9NVR2 710 aaKnown RBP4.09□□□□□ -1.75
HDDC2-207ENST00000608532 DBNLQ9UJU6 430 aaKnown RBP4.09□□□□□ -1.75
HDDC2-207ENST00000608532 C2CD2Q9Y426 696 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 YIPF1Q9Y548 306 aa4.09□□□□□ -1.75
HDDC2-207ENST00000608532 PLEKHD1A6NEE1 506 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 HHLA1C9JL84 531 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 H0YIN7 160 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 J3QR06 171 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 PLOD2O00469 737 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 SMAD9O15198 467 aaKnown RBP4.08□□□□□ -1.76
HDDC2-207ENST00000608532 CREB3O43889 395 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 ZNF217O75362 1048 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 TMEM63AO94886 807 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 PPIGQ13427 754 aaKnown RBP eCLIP4.08□□□□□ -1.76
HDDC2-207ENST00000608532 KRT32Q14532 448 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 MEP1AQ16819 746 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 ZC2HC1CQ53FD0 456 aaPredicted RBP4.08□□□□□ -1.76
HDDC2-207ENST00000608532 HAUS3Q68CZ6 603 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 PTOV1Q86YD1 416 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 POMGNT1Q8WZA1 660 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 SLX1AQ9BQ83 275 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 UNC45AQ9H3U1 944 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 SH2D4AQ9H788 454 aa4.08□□□□□ -1.76
HDDC2-207ENST00000608532 APOBEC3GQ9HC16 384 aaKnown RBP4.08□□□□□ -1.76
HDDC2-207ENST00000608532 ZBTB20Q9HC78 741 aaPredicted RBP4.08□□□□□ -1.76
HDDC2-207ENST00000608532 ARHGEF40Q8TER5 1519 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 ANTXRLA6NF34 631 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 B4E171 279 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 PLK4O00444 970 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 CD4P01730 458 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 PRSS56P0CW18 603 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 PSMA4P25789 261 aaKnown RBP4.07□□□□□ -1.76
HDDC2-207ENST00000608532 EPHA2P29317 976 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 ARL3P36405 182 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 MAP2K2P36507 400 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 TSPAN7P41732 249 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 GPR143P51810 404 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 PPP2R2BQ00005 443 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 MPP1Q00013 466 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 ZDHHC20Q5W0Z9 365 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 CCDC70Q6NSX1 233 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 KLHL35Q6PF15 583 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 TSPAN33Q86UF1 283 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 TEX11Q8IYF3 940 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 TMTC2Q8N394 836 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 SEMA4DQ92854 862 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 CMTM3Q96MX0 182 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 GFI1Q99684 422 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 PLK3Q9H4B4 646 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 KAT14Q9H8E8 782 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 KRT84Q9NSB2 600 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 OLA1Q9NTK5 396 aaKnown RBP4.07□□□□□ -1.76
HDDC2-207ENST00000608532 RCC2Q9P258 522 aaKnown RBP4.07□□□□□ -1.76
HDDC2-207ENST00000608532 TSPYL4Q9UJ04 414 aa4.07□□□□□ -1.76
HDDC2-207ENST00000608532 SCAMP1O15126 338 aa4.06□□□□□ -1.76
HDDC2-207ENST00000608532 HS6ST1O60243 411 aa4.06□□□□□ -1.76
HDDC2-207ENST00000608532 TMCC2O75069 709 aa4.06□□□□□ -1.76
HDDC2-207ENST00000608532 MBD4O95243 580 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms