RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PTPN5P54829 565 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 ADPRHP54922 357 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 KRT72Q14CN4 511 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 GPR33Q49SQ1 333 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 KLK6Q92876 244 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 RAB7BQ96AH8 199 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 PRR11Q96HE9 360 aaPredicted RBP17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 GPR21Q99679 349 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 MECRQ9BV79 373 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 IGSF5Q9NSI5 407 aa17.14■□□□□ 0.34
PPFIA3-207ENST00000602716 PRMT5O14744 637 aaPredicted RBP17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 INPP4BO15327 924 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 LZTS3O60299 673 aaPredicted RBP17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 GLRA3O75311 464 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 RHOBTB1O94844 696 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 PCDH8O95206 1070 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 ITGB6P18564 788 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 PRKCQQ04759 706 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 ZBTB16Q05516 673 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 ZDHHC20Q5W0Z9 365 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 FAM91A1Q658Y4 838 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 CERS6Q6ZMG9 384 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 TRIM67Q6ZTA4 783 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 KIRREL3Q8IZU9 778 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 TRAM1L1Q8N609 369 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 SIDT2Q8NBJ9 832 aaKnown RBP17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 PLA2G15Q8NCC3 412 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 HMGB4Q8WW32 186 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 NXNL1Q96CM4 212 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 SMOXQ9NWM0 555 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 LRRC42Q9Y546 428 aa17.14■□□□□ 0.33
PPFIA3-207ENST00000602716 AP1G1O43747 822 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 ENTPD5O75356 428 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 SLC12A2P55011 1212 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 PPP2CBP62714 309 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 PPP2CAP67775 309 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 ITGA9Q13797 1035 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 ZNF284Q2VY69 593 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 NAPRTQ6XQN6 538 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 DET1Q7L5Y6 550 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 CYP2U1Q7Z449 544 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 RBFAQ8N0V3 343 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 OR14C36Q8NHC7 312 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 SCG3Q8WXD2 468 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 GPR78Q96P69 363 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 FBRSQ9HAH7 460 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 GPAMQ9HCL2 828 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 ZDHHC3Q9NYG2 299 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 WNT16Q9UBV4 365 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 CORO1CQ9ULV4 474 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 IGLV3-16A0A075B6K0 115 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 TK2O00142 265 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 PLRG1O43660 514 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 PLIN3O60664 434 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 LMNAP02545 664 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 PROCP04070 461 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 MYL2P10916 166 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 CRABP2P29373 138 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 STARD6P59095 220 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 CREB5Q02930 508 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 CSHL1Q14406 222 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 TAF11Q15544 211 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 TRIM42Q8IWZ5 723 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 C7orf26Q96N11 449 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 COPS8Q99627 209 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 ZSCAN5AQ9BUG6 496 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 TLK1Q9UKI8 766 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 IKZF3Q9UKT9 509 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 CNOT6Q9ULM6 557 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 ACOT9Q9Y305 439 aa17.13■□□□□ 0.33
PPFIA3-207ENST00000602716 NUMA1Q14980 2115 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 KANSL1LA0AUZ9 987 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 FAM170BA6NMN3 283 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 FCHO1O14526 889 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 GSC2O15499 205 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 ESR1P03372 595 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 SBK3P0C264 359 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 ZNF37AP17032 561 aaPredicted RBP17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 POLD2P49005 469 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 ADARP55265 1226 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 HSF5Q4G112 596 aaPredicted RBP17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 CES4AQ5XG92 561 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 PAQR3Q6TCH7 311 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 NRSN1Q8IZ57 195 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 CFAP61Q8NHU2 1237 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 CD200R1Q8TD46 325 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 HEXDCQ8WVB3 486 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 HHIPQ96QV1 700 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 CLPBQ9H078 707 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 CCDC68Q9H2F9 335 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 TBC1D17Q9HA65 648 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 SARS2Q9NP81 518 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 SIRPGQ9P1W8 387 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 EBF1Q9UH73 591 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 TSR3Q9UJK0 312 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 VPS9D1Q9Y2B5 631 aa17.12■□□□□ 0.33
PPFIA3-207ENST00000602716 OAS3Q9Y6K5 1087 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms