RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 SRP54P61011 504 aaKnown RBP14.15□□□□□ -0.14
UPF1-211ENST00000600868 EIF2B5Q13144 721 aaKnown RBP14.15□□□□□ -0.14
UPF1-211ENST00000600868 FZD2Q14332 565 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 DUOXA1Q1HG43 343 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 LGSNQ5TDP6 509 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 PTRHD1Q6GMV3 140 aaKnown RBP14.15□□□□□ -0.14
UPF1-211ENST00000600868 LAYNQ6UX15 382 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 DET1Q7L5Y6 550 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 CROCCP2Q86T23 111 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 SPATS2Q86XZ4 545 aaKnown RBP14.15□□□□□ -0.14
UPF1-211ENST00000600868 ZNF547Q8IVP9 402 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 OR1E3Q8WZA6 343 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 LINC00615Q96LM1 132 aaPredicted RBP14.15□□□□□ -0.14
UPF1-211ENST00000600868 GPR22Q99680 433 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 FGF22Q9HCT0 170 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 EURLQ9NYK6 297 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 KLQ9UEF7 1012 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 MTO1Q9Y2Z2 717 aaKnown RBP14.15□□□□□ -0.14
UPF1-211ENST00000600868 DNMT3AQ9Y6K1 912 aaPredicted RBP14.15□□□□□ -0.14
UPF1-211ENST00000600868 DGKBQ9Y6T7 804 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 FAM95CA0A1B0GW59 222 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 OR2AG2A6NM03 316 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 KMOO15229 486 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 GRID2O43424 1007 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 FTH1P02794 183 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 GSTM1P09488 218 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 ABCG1P45844 678 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 POU4F1Q01851 419 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 GSTM4Q03013 218 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 ZNF844Q08AG5 666 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 LPAL2Q16609 132 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 ALG11Q2TAA5 492 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 PYCR3Q53H96 274 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 RBM20Q5T481 1227 aaKnown RBP14.14□□□□□ -0.15
UPF1-211ENST00000600868 HECTD2Q5U5R9 776 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 LAIR1Q6GTX8 287 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 FAM45BPQ6NSW5 357 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 LRRTM4Q86VH4 590 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 PARGQ86W56 976 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 TRAPPC5Q8IUR0 188 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 RIBC1Q8N443 379 aaPredicted RBP14.14□□□□□ -0.15
UPF1-211ENST00000600868 FAM45AQ8TCE6 357 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 EPS8L3Q8TE67 593 aaKnown RBP14.14□□□□□ -0.15
UPF1-211ENST00000600868 KCNJ9Q92806 393 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 ATXN7L3BQ96GX2 97 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 PANX3Q96QZ0 392 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 NDNQ99608 321 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 TSSK1BQ9BXA7 367 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 VIPAS39Q9H9C1 493 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 ERVMER34-1Q9H9K5 563 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 LATS2Q9NRM7 1088 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 ZNHIT2Q9UHR6 403 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 SUFUQ9UMX1 484 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 SMG5Q9UPR3 1016 aaKnown RBP14.14□□□□□ -0.15
UPF1-211ENST00000600868 ANKRD6Q9Y2G4 727 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 MED16Q9Y2X0 877 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 VWA7Q9Y334 891 aa14.14□□□□□ -0.15
UPF1-211ENST00000600868 IQANK1A0A1B0GTG1 560 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 A0A1B0GVT2 93 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 HMX2A2RU54 273 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 KLHL33A6NCF5 533 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 KRT37O76014 449 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 TNFP01375 233 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 SNRPAP09012 282 aaKnown RBP14.13□□□□□ -0.15
UPF1-211ENST00000600868 FDXRP22570 491 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 CTSKP43235 329 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 SLCO1A2P46721 670 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 BLKP51451 505 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 HK3P52790 923 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 PPARDQ03181 441 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 KCTD16Q68DU8 428 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 SLC23A3Q6PIS1 610 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 C11orf96Q7Z7L8 435 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 GALNT13Q8IUC8 556 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 HID1Q8IV36 788 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 DCLK2Q8N568 766 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 BEND7Q8N7W2 519 aaPredicted RBP14.13□□□□□ -0.15
UPF1-211ENST00000600868 GPATCH11Q8N954 259 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 NAT14Q8WUY8 206 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 TSACCQ96A04 125 aaPredicted RBP14.13□□□□□ -0.15
UPF1-211ENST00000600868 MTBPQ96DY7 904 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 ELMO2Q96JJ3 720 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 OR2M4Q96R27 311 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 CCM2Q9BSQ5 444 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 CARS2Q9HA77 564 aaKnown RBP14.13□□□□□ -0.15
UPF1-211ENST00000600868 CYP4F12Q9HCS2 524 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 MRPL40Q9NQ50 206 aaKnown RBP14.13□□□□□ -0.15
UPF1-211ENST00000600868 TAS2R13Q9NYV9 303 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 KLHL42Q9P2K6 505 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 LGALS13Q9UHV8 139 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 MOSPD1Q9UJG1 213 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 PNMA8BQ9ULN7 279 aaPredicted RBP14.13□□□□□ -0.15
UPF1-211ENST00000600868 PCYT1BQ9Y5K3 369 aaPredicted RBP14.13□□□□□ -0.15
UPF1-211ENST00000600868 PIKFYVEQ9Y2I7 2098 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 SDK1Q7Z5N4 2213 aa14.13□□□□□ -0.15
UPF1-211ENST00000600868 CACNA1HO95180 2353 aa14.12□□□□□ -0.15
UPF1-211ENST00000600868 LRP4O75096 1905 aa14.12□□□□□ -0.15
UPF1-211ENST00000600868 C17orf113A0A1B0GUU1 675 aa14.12□□□□□ -0.15
UPF1-211ENST00000600868 TLDC2A0PJX2 215 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms