RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 POLR1BQ9H9Y6 1135 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 RAB6BQ9NRW1 208 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 SCHIP1Q9P0W5 487 aaPredicted RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF624Q9P2J8 865 aaPredicted RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 ACSL6Q9UKU0 697 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 PYCARDQ9ULZ3 195 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 GPSM3Q9Y4H4 160 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 A0A087WV48 116 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 C17orf113A0A1B0GUU1 675 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 LILRA5A6NI73 299 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 TLX3O43711 291 aaPredicted RBP8.64□□□□□ -1.03
SSBP4-208ENST00000600628 CPNE6O95741 557 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 IFNB1P01574 187 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 SLC4A1P02730 911 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 ACP5P13686 325 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 TPH1P17752 444 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 IVDP26440 423 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 CSF2RBP32927 897 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 COILP38432 576 aaPredicted RBP8.64□□□□□ -1.03
SSBP4-208ENST00000600628 SLC19A1P41440 591 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 PRLHRP49683 370 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 CDKN1CP49918 316 aaPredicted RBP8.64□□□□□ -1.03
SSBP4-208ENST00000600628 EPHA4P54764 986 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 GPLD1P80108 840 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 LONRF2Q1L5Z9 754 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 WDR74Q6RFH5 385 aaPredicted RBP8.64□□□□□ -1.03
SSBP4-208ENST00000600628 PACS1Q6VY07 963 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 FAM83HQ6ZRV2 1179 aaPredicted RBP8.64□□□□□ -1.03
SSBP4-208ENST00000600628 MICALCLQ6ZW33 695 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 CLEC14AQ86T13 490 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 LSMEM2Q8N112 164 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 OR52K1Q8NGK4 314 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 ATXN7L3BQ96GX2 97 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 SLC46A1Q96NT5 459 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 ZCCHC2Q9C0B9 1178 aaKnown RBP8.64□□□□□ -1.03
SSBP4-208ENST00000600628 B3GNT4Q9C0J1 378 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 ASB8Q9H765 288 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 SUDS3Q9H7L9 328 aaPredicted RBP8.64□□□□□ -1.03
SSBP4-208ENST00000600628 SLC40A1Q9NP59 571 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 PRDM8Q9NQV8 689 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 KLC4Q9NSK0 619 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 TREX1Q9NSU2 369 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 SEMA5BQ9P283 1151 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 CPNE7Q9UBL6 633 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 PCYOX1Q9UHG3 505 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 KCNK6Q9Y257 313 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 WDR37Q9Y2I8 494 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 TCAF1Q9Y4C2 921 aa8.64□□□□□ -1.03
SSBP4-208ENST00000600628 SDK2Q58EX2 2172 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 MN1Q10571 1320 aaPredicted RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 TCRBV7S3A2A0A539 114 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 HEATR9A2RTY3 570 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 PMS2P1A4D2B8 440 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 TMX2-CTNND1H3BSU7 103 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 PGRMC1O00264 195 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 CCL22O00626 93 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 TP73O15350 636 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 BRINP1O60477 761 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 POP7O75817 140 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 MPOP05164 745 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 RPLP0P05388 317 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 PTMAP06454 111 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 APRTP07741 180 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 PRSS56P0CW18 603 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ATP1B2P14415 290 aaPredicted RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 HOXB3P14651 431 aaPredicted RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ADRA1DP25100 572 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ACRV1P26436 265 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ARNTP27540 789 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ACTN2P35609 894 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 FNTAP49354 379 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 LIMK2P53671 638 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 OR1D5P58170 312 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ERVPABLB-1P60509 514 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 HHEXQ03014 270 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 CBLBQ13191 982 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 EIF3IQ13347 325 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 SPIDRQ14159 915 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 GSE1Q14687 1217 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 POU6F1Q14863 301 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 CLCA4Q14CN2 919 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 TBC1D25Q3MII6 688 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 TSTD2Q5T7W7 516 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 CAPRIN2Q6IMN6 1127 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 LRRC8BQ6P9F7 803 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ARHGAP22Q7Z5H3 698 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 CAND1Q86VP6 1230 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 AMZ2Q86W34 360 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 CREG2Q8IUH2 290 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 CCDC89Q8N998 374 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 AVL9Q8NBF6 648 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 MCUQ8NE86 351 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 OR4D9Q8NGE8 314 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 OR2L2Q8NH16 312 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 CPT1BQ92523 772 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 FGF11Q92914 225 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 ULK4Q96C45 1275 aa8.63□□□□□ -1.03
SSBP4-208ENST00000600628 GFM1Q96RP9 751 aaKnown RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 NAP1L3Q99457 506 aaPredicted RBP8.63□□□□□ -1.03
SSBP4-208ENST00000600628 KIFC1Q9BW19 673 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms