RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 ZDHHC18Q9NUE0 388 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 DLL3Q9NYJ7 618 aa19.07■□□□□ 0.64
UPF1-209ENST00000600310 ZC3H7BQ9UGR2 993 aaKnown RBP19.07■□□□□ 0.64
UPF1-209ENST00000600310 DNMT3AQ9Y6K1 912 aaPredicted RBP19.07■□□□□ 0.64
UPF1-209ENST00000600310 GOLGA8KD6RF30 607 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 GOLGA8TH3BQL2 631 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 SIGLEC6O43699 453 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 ACP5P13686 325 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 ZNF7P17097 686 aaPredicted RBP19.06■□□□□ 0.64
UPF1-209ENST00000600310 NSG1P42857 185 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 TTPAP49638 278 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 CLCNKAP51800 687 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 FASTKD3Q14CZ7 662 aaKnown RBP19.06■□□□□ 0.64
UPF1-209ENST00000600310 STEAP4Q687X5 459 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 MRNIPQ6NTE8 343 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 NEPROQ6NW34 567 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 UNC5AQ6ZN44 842 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 DET1Q7L5Y6 550 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 C11orf96Q7Z7L8 435 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 LDB1Q86U70 411 aaPredicted RBP19.06■□□□□ 0.64
UPF1-209ENST00000600310 FAM181AQ8N9Y4 354 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 FBXO36Q8NEA4 188 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 LINC00615Q96LM1 132 aaPredicted RBP19.06■□□□□ 0.64
UPF1-209ENST00000600310 CDC6Q99741 560 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 TIMM29Q9BSF4 260 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 SLC32A1Q9H598 525 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 C20orf96Q9NUD7 363 aaPredicted RBP19.06■□□□□ 0.64
UPF1-209ENST00000600310 SLC23A2Q9UGH3 650 aa19.06■□□□□ 0.64
UPF1-209ENST00000600310 TDRD6O60522 2096 aaKnown RBP19.05■□□□□ 0.64
UPF1-209ENST00000600310 OR2AG2A6NM03 316 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 KCNJ13O60928 360 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 POP7O75817 140 aaKnown RBP19.05■□□□□ 0.64
UPF1-209ENST00000600310 AP2A2O94973 939 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 OGNP20774 298 aaKnown RBP19.05■□□□□ 0.64
UPF1-209ENST00000600310 ACTR1BP42025 376 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 PRLHRP49683 370 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 ACTR1AP61163 376 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 THOC5Q13769 683 aaKnown RBP19.05■□□□□ 0.64
UPF1-209ENST00000600310 TYSND1Q2T9J0 566 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 C6orf132Q5T0Z8 1188 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 ZCCHC8Q6NZY4 707 aaKnown RBP19.05■□□□□ 0.64
UPF1-209ENST00000600310 SLC30A9Q6PML9 568 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 SDCCAG8Q86SQ7 713 aaPredicted RBP19.05■□□□□ 0.64
UPF1-209ENST00000600310 ANKMY2Q8IV38 441 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 LMNTD2Q8IXW0 634 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 ZBED8Q8IZ13 594 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 OTUD6BQ8N6M0 293 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 FAM46DQ8NEK8 389 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 DEFB124Q8NES8 71 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 CFAP36Q96G28 342 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 TCF12Q99081 682 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 SAYSD1Q9NPB0 183 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 IL1RAPL1Q9NZN1 696 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 TAAR2Q9P1P5 351 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 KCNK6Q9Y257 313 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 PLXNB3Q9ULL4 1909 aa19.05■□□□□ 0.64
UPF1-209ENST00000600310 PRR19A6NJB7 356 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 OR1I1O60431 355 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 PMLP29590 882 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 FRG1Q14331 258 aaKnown RBP19.04■□□□□ 0.64
UPF1-209ENST00000600310 SMAD1Q15797 465 aaKnown RBP19.04■□□□□ 0.64
UPF1-209ENST00000600310 INSCQ1MX18 579 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 PROX2Q3B8N5 592 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 OGFOD3Q6PK18 319 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 AMZ2Q86W34 360 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 CLDN19Q8N6F1 224 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 BEND7Q8N7W2 519 aaPredicted RBP19.04■□□□□ 0.64
UPF1-209ENST00000600310 CALML6Q8TD86 181 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 PYROXD1Q8WU10 500 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 NAT14Q8WUY8 206 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 KLC4Q9NSK0 619 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 SPATS2LQ9NUQ6 558 aaKnown RBP19.04■□□□□ 0.64
UPF1-209ENST00000600310 FTSJ1Q9UET6 329 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 PRSS21Q9Y6M0 314 aa19.04■□□□□ 0.64
UPF1-209ENST00000600310 KLHL33A6NCF5 533 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 MGAT4DA6NG13 374 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 QSOX1O00391 747 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 NDUFS3O75489 264 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 LDOC1O95751 146 aaPredicted RBP19.03■□□□□ 0.64
UPF1-209ENST00000600310 RHOXF2BP0C7M4 288 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 VCLP18206 1134 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 DMPKQ09013 629 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 CUL1Q13616 776 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 PLA2G4EQ3MJ16 856 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 RNF187Q5TA31 235 aaPredicted RBP19.03■□□□□ 0.64
UPF1-209ENST00000600310 GLRX5Q86SX6 157 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 KCNMB4Q86W47 210 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 CILP2Q8IUL8 1156 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 IFT20Q8IY31 132 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 UNC5BQ8IZJ1 945 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 IFT81Q8WYA0 676 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 CERS2Q96G23 380 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 CNDP2Q96KP4 475 aaKnown RBP19.03■□□□□ 0.64
UPF1-209ENST00000600310 APOLD1Q96LR9 279 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 RHOXF2Q9BQY4 288 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 FAM167BQ9BTA0 163 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 DPEP2Q9H4A9 486 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 MTRF1LQ9UGC7 380 aaKnown RBP19.03■□□□□ 0.64
UPF1-209ENST00000600310 DNAH14Q0VDD8 3507 aa19.03■□□□□ 0.64
UPF1-209ENST00000600310 CACNA1AO00555 2505 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms