RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PCDHGA4Q9Y5G9 962 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 DUSP10Q9Y6W6 482 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 ATMQ13315 3056 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 C2orf81A6NN90 581 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 A8MU76 341 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 PDZK1P1A8MUH7 402 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 STK10O94804 968 aaKnown RBP15.54■□□□□ 0.08
VRK3-221ENST00000600284 UBXN7O94888 489 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 TJP3O95049 919 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 C9P02748 559 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 BRAFP15056 766 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 UGT1A3P35503 534 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 MAPK9P45984 424 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 OTUD4Q01804 1114 aaKnown RBP15.54■□□□□ 0.08
VRK3-221ENST00000600284 DMPKQ09013 629 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 SRSF6Q13247 344 aaKnown RBP15.54■□□□□ 0.08
VRK3-221ENST00000600284 LY6DQ14210 128 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 PRPSAP1Q14558 356 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 CHRNA6Q15825 494 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 PLA2G4EQ3MJ16 856 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 CEACAM20Q6UY09 585 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 VASH2Q86V25 355 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 TRAPPC5Q8IUR0 188 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 PMEPA1Q969W9 287 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 RTP4Q96DX8 246 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 ZNF514Q96K75 400 aaPredicted RBP15.54■□□□□ 0.08
VRK3-221ENST00000600284 C19orf43Q9BQ61 176 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 SPRY4Q9C004 299 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 RBSNQ9H1K0 784 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 SLC40A1Q9NP59 571 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 DNAJC16Q9Y2G8 782 aa15.54■□□□□ 0.08
VRK3-221ENST00000600284 KLHL33A6NCF5 533 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 C5orf60A6NFR6 353 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 F5H423 210 aaPredicted RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 STX7O15400 261 aaKnown RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 CAPN5O15484 640 aaPredicted RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 UGT1A9O60656 530 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 AGTP01019 485 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 RBP3P10745 1247 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 AMD1P17707 334 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 UGT1A6P19224 532 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 LPOP22079 712 aaPredicted RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 UGT1A1P22309 533 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 UGT1A4P22310 534 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 RPL10P27635 214 aaKnown RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 ADRA1AP35348 466 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 HALP42357 657 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 VAV2P52735 878 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 EIF3EP60228 445 aaKnown RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 PDE1BQ01064 536 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 TAF1AQ15573 450 aaPredicted RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 LINC00303Q3SY05 128 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 ANKRD20A2Q5SQ80 823 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 ANKRD20A1Q5TYW2 823 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 ANKRD20A3Q5VUR7 823 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 ANKS6Q68DC2 871 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 FAM151BQ6UXP7 276 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 RAD9BQ6WBX8 426 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 AMZ2Q86W34 360 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 CACNA2D3Q8IZS8 1091 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 TXLNBQ8N3L3 684 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 IL22RA1Q8N6P7 574 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 LRRC57Q8N9N7 239 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 ZNF398Q8TD17 642 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 CXorf40BQ96DE9 158 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 C9orf72Q96LT7 481 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 GORASP1Q9BQQ3 440 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 SEMA4CQ9C0C4 833 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 LACRTQ9GZZ8 138 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 TRIT1Q9H3H1 467 aaKnown RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 UGT1A7Q9HAW7 530 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 UGT1A10Q9HAW8 530 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 UGT1A8Q9HAW9 530 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 PILRAQ9UKJ1 303 aa15.53■□□□□ 0.08
VRK3-221ENST00000600284 REXO2Q9Y3B8 237 aaKnown RBP15.53■□□□□ 0.08
VRK3-221ENST00000600284 GAPDHSO14556 408 aaPredicted RBP15.52■□□□□ 0.08
VRK3-221ENST00000600284 POP7O75817 140 aaKnown RBP15.52■□□□□ 0.08
VRK3-221ENST00000600284 SFTPCP11686 197 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 MAP4P27816 1152 aaKnown RBP15.52■□□□□ 0.08
VRK3-221ENST00000600284 SEPT7Q16181 437 aaKnown RBP15.52■□□□□ 0.08
VRK3-221ENST00000600284 LONRF2Q1L5Z9 754 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 GPRC6AQ5T6X5 926 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 DARS2Q6PI48 645 aaKnown RBP15.52■□□□□ 0.08
VRK3-221ENST00000600284 TMEM220Q6QAJ8 160 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 RASGEF1AQ8N9B8 481 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 LRRC45Q96CN5 670 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 ARHGAP9Q9BRR9 750 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 EFHD1Q9BUP0 239 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 FICDQ9BVA6 458 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 RAB33BQ9H082 229 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 C10orf88Q9H8K7 445 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 EPHA6Q9UF33 1036 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 FEZ2Q9UHY8 353 aaPredicted RBP15.52■□□□□ 0.08
VRK3-221ENST00000600284 SLC30A1Q9Y6M5 507 aa15.52■□□□□ 0.08
VRK3-221ENST00000600284 SDK2Q58EX2 2172 aa15.52■□□□□ 0.07
VRK3-221ENST00000600284 MACROD2A1Z1Q3 448 aa15.51■□□□□ 0.07
VRK3-221ENST00000600284 OR52A4PA6NMU1 304 aa15.51■□□□□ 0.07
VRK3-221ENST00000600284 B8ZZF3 427 aa15.51■□□□□ 0.07
VRK3-221ENST00000600284 POLR1CO15160 346 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms