RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 BEND7Q8N7W2 519 aaPredicted RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 GPR156Q8NFN8 814 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 GPR150Q8NGU9 434 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 ZNF669Q96BR6 464 aaPredicted RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 LINC00615Q96LM1 132 aaPredicted RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 TAAR2Q9P1P5 351 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 DNMT3AQ9Y6K1 912 aaPredicted RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 OR2AG2A6NM03 316 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 POP7O75817 140 aaKnown RBP13.53□□□□□ -0.24
VRK3-219ENST00000600137 LDOC1O95751 146 aaPredicted RBP13.53□□□□□ -0.24
VRK3-219ENST00000600137 ACP5P13686 325 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 PGAM1P18669 254 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 MSH3P20585 1137 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 ECHS1P30084 290 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 ID4P47928 161 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 PLTPP55058 493 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 ARL4CP56559 192 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 DMPKQ09013 629 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 ILF3Q12906 894 aaKnown RBP eCLIP13.53□□□□□ -0.24
VRK3-219ENST00000600137 DNAJC3Q13217 504 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 ITIH4Q14624 930 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 TRIP6Q15654 476 aaKnown RBP13.53□□□□□ -0.24
VRK3-219ENST00000600137 GLE1Q53GS7 698 aaKnown RBP13.53□□□□□ -0.24
VRK3-219ENST00000600137 FASTKD1Q53R41 847 aaKnown RBP13.53□□□□□ -0.24
VRK3-219ENST00000600137 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 ZCCHC8Q6NZY4 707 aaKnown RBP13.53□□□□□ -0.24
VRK3-219ENST00000600137 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 PACS1Q6VY07 963 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 CERS6Q6ZMG9 384 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 FAM83HQ6ZRV2 1179 aaPredicted RBP13.53□□□□□ -0.24
VRK3-219ENST00000600137 CENPUQ71F23 418 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 NAGSQ8N159 534 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 FAM46DQ8NEK8 389 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 HEXDCQ8WVB3 486 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 PATE1Q8WXA2 126 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 LRRC39Q96DD0 335 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 CNDP2Q96KP4 475 aaKnown RBP13.53□□□□□ -0.24
VRK3-219ENST00000600137 TIMM29Q9BSF4 260 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 DUSP23Q9BVJ7 150 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 GSDMCQ9BYG8 508 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 P2RY12Q9H244 342 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 KLC4Q9NSK0 619 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 CATSPERZQ9NTU4 200 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 SAMD15Q9P1V8 674 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 TBC1D29Q9UFV1 150 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 KCNK6Q9Y257 313 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 MAD1L1Q9Y6D9 718 aa13.53□□□□□ -0.24
VRK3-219ENST00000600137 SPAARA0A1B0GVQ0 90 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 TNFSF14O43557 240 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 CKMT1AP12532 417 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 CKMT2P17540 419 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 AKT1P31749 480 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 ACTR1BP42025 376 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 NSG1P42857 185 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 PRLHRP49683 370 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 ACTR1AP61163 376 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 GUCY2DQ02846 1103 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 PDIA2Q13087 525 aaKnown RBP13.52□□□□□ -0.25
VRK3-219ENST00000600137 CALCOCO2Q13137 446 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 CRYMQ14894 314 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 SMAD1Q15797 465 aaKnown RBP13.52□□□□□ -0.25
VRK3-219ENST00000600137 TYSND1Q2T9J0 566 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 DNAJC21Q5F1R6 531 aaKnown RBP13.52□□□□□ -0.25
VRK3-219ENST00000600137 NEPROQ6NW34 567 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 SLC30A9Q6PML9 568 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 UNC5AQ6ZN44 842 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 DET1Q7L5Y6 550 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 TRAPPC5Q8IUR0 188 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 ZNF514Q96K75 400 aaPredicted RBP13.52□□□□□ -0.25
VRK3-219ENST00000600137 TTC25Q96NG3 672 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 CDC6Q99741 560 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 NAT9Q9BTE0 207 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 ZCCHC2Q9C0B9 1178 aaKnown RBP13.52□□□□□ -0.25
VRK3-219ENST00000600137 EPB41L5Q9HCM4 733 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 SCHIP1Q9P0W5 487 aaPredicted RBP13.52□□□□□ -0.25
VRK3-219ENST00000600137 CHMP2BQ9UQN3 213 aa13.52□□□□□ -0.25
VRK3-219ENST00000600137 EME2A4GXA9 379 aaPredicted RBP13.51□□□□□ -0.25
VRK3-219ENST00000600137 MGAT4DA6NG13 374 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 NDC80O14777 642 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 CASC3O15234 703 aaKnown RBP13.51□□□□□ -0.25
VRK3-219ENST00000600137 EIF3HO15372 352 aaKnown RBP eCLIP13.51□□□□□ -0.25
VRK3-219ENST00000600137 KCNJ13O60928 360 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 TTC4O95801 387 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 S1PR4O95977 384 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 C1QAP02745 245 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 POLBP06746 335 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 F7P08709 466 aaPredicted RBP13.51□□□□□ -0.25
VRK3-219ENST00000600137 BRAFP15056 766 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 ACP1P24666 158 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 ACADVLP49748 655 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 NOVA1P51513 510 aaKnown RBP13.51□□□□□ -0.25
VRK3-219ENST00000600137 CAV1Q03135 178 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 GTF2H3Q13889 308 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 FRG1Q14331 258 aaKnown RBP13.51□□□□□ -0.25
VRK3-219ENST00000600137 HLTFQ14527 1009 aaKnown RBP eCLIP13.51□□□□□ -0.25
VRK3-219ENST00000600137 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 INAVAQ3KP66 663 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
VRK3-219ENST00000600137 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms