RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 UHMK1Q8TAS1 419 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 UBLCP1Q8WVY7 318 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CPNE1Q99829 537 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 DHRS4Q9BTZ2 278 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CLPBQ9H078 707 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 TCEAL2Q9H3H9 227 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 SMOC1Q9H4F8 434 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CAAP1Q9H8G2 361 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CARS2Q9HA77 564 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CYP4F12Q9HCS2 524 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 FSCN3Q9NQT6 498 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 TRNAU1APQ9NX07 287 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 FETUBQ9UGM5 382 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 CRYL1Q9Y2S2 319 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 MED16Q9Y2X0 877 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 PCDHB1Q9Y5F3 818 aa12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 DNMT3AQ9Y6K1 912 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-206ENST00000600118 UBA6A0AVT1 1052 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 OR2AG2A6NM03 316 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 QSOX1O00391 747 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 ARHGAP33O14559 1287 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 KHNYNO15037 678 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 LRP3O75074 770 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 TNFP01375 233 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 SHBGP04278 402 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 SYPP08247 313 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 NUDT17P0C025 328 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 OR56A5P0C7T3 313 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 PKMP14618 531 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 TGM1P22735 817 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 FMO4P31512 558 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 GP5P40197 560 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 GNPDA1P46926 289 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 BLKP51451 505 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 EIF3BP55884 814 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 NHLH1Q02575 133 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 ILF2Q12905 390 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 HLA-BQ31612 363 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 ZNF542PQ5EBM4 170 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 PRAMEF14Q5SWL7 426 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 TCEAL6Q6IPX3 200 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 CRTC3Q6UUV7 619 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 IL27RAQ6UWB1 636 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 XKR5Q6UX68 686 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 LRRTM4Q86VH4 590 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 GALNT13Q8IUC8 556 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 BEND7Q8N7W2 519 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 SLC44A1Q8WWI5 657 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 TCEAL3Q969E4 200 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 OR2M4Q96R27 311 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 ELF4Q99607 663 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 AARSD1Q9BTE6 412 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 NUSAP1Q9BXS6 441 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 TM7SF3Q9NS93 570 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 DNAJC28Q9NX36 388 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 GULP1Q9UBP9 304 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 SLC23A2Q9UGH3 650 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 GNPTGQ9UJJ9 305 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 CORO1CQ9ULV4 474 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 PRKAB1Q9Y478 270 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 ST14Q9Y5Y6 855 aa12.46□□□□□ -0.41
CHMP2A-206ENST00000600118 PLXNB3Q9ULL4 1909 aa12.46□□□□□ -0.42
CHMP2A-206ENST00000600118 CACNA1EQ15878 2313 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 OTOGLQ3ZCN5 2332 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 PCDH15Q96QU1 1955 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 A0A1B0GTQ1 180 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 H3BMM5 538 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 KMOO15229 486 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 DFNA5O60443 496 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 POP7O75817 140 aaKnown RBP12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 FAM155BO75949 473 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 GSTM1P09488 218 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 JUNDP17535 347 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 ENGP17813 658 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 CD9P21926 228 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 GCAP28676 217 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 ABCG1P45844 678 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 CLCNKAP51800 687 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 HNRNPKP61978 463 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 TIAL1Q01085 375 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 GSTM4Q03013 218 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 DMPKQ09013 629 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 LRP8Q14114 963 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 RBM20Q5T481 1227 aaKnown RBP12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 GRTP1Q5TC63 336 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 RD3Q7Z3Z2 195 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 TRAPPC5Q8IUR0 188 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 LKAAEAR1Q8TD35 194 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 GPBAR1Q8TDU6 330 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 VPS39Q96JC1 886 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 PAFAH2Q99487 392 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 RBBP8Q99708 897 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 TIMM29Q9BSF4 260 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 LRRC61Q9BV99 259 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 SLC13A1Q9BZW2 595 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 TMEM168Q9H0V1 697 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 PARD6AQ9NPB6 346 aa12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 APOBEC3BQ9UH17 382 aaKnown RBP12.45□□□□□ -0.42
CHMP2A-206ENST00000600118 ZNHIT2Q9UHR6 403 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms