RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 GLRX5Q86SX6 157 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 RELL1Q8IUW5 271 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 GPR150Q8NGU9 434 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 PYROXD1Q8WU10 500 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 UBXN4Q92575 508 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 PDXPQ96GD0 296 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 MRPL40Q9NQ50 206 aaKnown RBP18.62■□□□□ 0.57
CCDC9-205ENST00000600117 ZDHHC3Q9NYG2 299 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 ATXN10Q9UBB4 475 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 KLQ9UEF7 1012 aa18.62■□□□□ 0.57
CCDC9-205ENST00000600117 PRSS38A1L453 326 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 CD3EAPO15446 510 aaKnown RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 DNAJC6O75061 913 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 ASMTLO95671 621 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 CSF2P04141 144 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 IVLP07476 585 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 NME1P15531 152 aaKnown RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 SRP54P61011 504 aaKnown RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 HLA-BQ31612 363 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 FASTKD1Q53R41 847 aaKnown RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 ZNF542PQ5EBM4 170 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 NEPROQ6NW34 567 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 TRMT10BQ6PF06 316 aaKnown RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 LDB1Q86U70 411 aaPredicted RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 GSPT2Q8IYD1 628 aaKnown RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 TSACCQ96A04 125 aaPredicted RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 C9orf72Q96LT7 481 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 ELF4Q99607 663 aaPredicted RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 TSPYL1Q9H0U9 437 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 TCEAL2Q9H3H9 227 aaPredicted RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 C20orf96Q9NUD7 363 aaPredicted RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 PCYT1BQ9Y5K3 369 aaPredicted RBP18.61■□□□□ 0.57
CCDC9-205ENST00000600117 DGKBQ9Y6T7 804 aa18.61■□□□□ 0.57
CCDC9-205ENST00000600117 VEGFDO43915 354 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 FAM153BP0C7A2 387 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 ZNF8P17098 575 aaPredicted RBP18.6■□□□□ 0.57
CCDC9-205ENST00000600117 SSTR1P30872 391 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 RXRGP48443 463 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 GPX6P59796 221 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 PPARDQ03181 441 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 TMEM115Q12893 351 aaPredicted RBP18.6■□□□□ 0.57
CCDC9-205ENST00000600117 ITIH4Q14624 930 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 TYSND1Q2T9J0 566 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 FAM153CQ494X1 144 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 IL27RAQ6UWB1 636 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 CERS6Q6ZMG9 384 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 CEP128Q6ZU80 1094 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 SLCO6A1Q86UG4 719 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 KCNMB4Q86W47 210 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 PHACTR4Q8IZ21 702 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 RASGEF1AQ8N9B8 481 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 GSDMBQ8TAX9 411 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 GDAP1Q8TB36 358 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.6■□□□□ 0.57
CCDC9-205ENST00000600117 CERS2Q96G23 380 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 COPS8Q99627 209 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 BOCQ9BWV1 1114 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 OR2AG1Q9H205 316 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 IL21RQ9HBE5 538 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 DNAJC28Q9NX36 388 aa18.6■□□□□ 0.57
CCDC9-205ENST00000600117 A0A1B0GTQ1 180 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 CHUKO15111 745 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 SGTAO43765 313 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 NUAK1O60285 661 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 CBFA2T3O75081 653 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 RASGRP1O95267 797 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 ERVK-10P10266 1014 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 OGNP20774 298 aaKnown RBP18.59■□□□□ 0.57
CCDC9-205ENST00000600117 HK3P52790 923 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 VSNL1P62760 191 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 LYPLAL1Q5VWZ2 237 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
CCDC9-205ENST00000600117 HID1Q8IV36 788 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 PALM2Q8IXS6 379 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 RBFAQ8N0V3 343 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 OXR1Q8N573 874 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 HEXDCQ8WVB3 486 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 GAREM1Q9H706 876 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 RMI1Q9H9A7 625 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 LRRC4CQ9HCJ2 640 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 CYP4F12Q9HCS2 524 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 MOCS1Q9NZB8 636 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 NINJ2Q9NZG7 142 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 SUFUQ9UMX1 484 aa18.59■□□□□ 0.57
CCDC9-205ENST00000600117 GPR89AB7ZAQ6 455 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 DFNA5O60443 496 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 CDK14O94921 469 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 CER1O95813 267 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 C1QAP02745 245 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 GSTA2P09210 222 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 GPR89BP0CG08 455 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 JUNDP17535 347 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 MSH3P20585 1137 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 AKT1P31749 480 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 CTSCP53634 463 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 THOC5Q13769 683 aaKnown RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 NAA30Q147X3 362 aaPredicted RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 PYCR3Q53H96 274 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 HSP90AA5PQ58FG0 334 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms