RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 OR52A4PA6NMU1 304 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 ZNF487B1APH4 448 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 MTX2O75431 263 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 BPIP17213 487 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 KDELR1P24390 212 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 HALP42357 657 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 DRG2P55039 364 aaKnown RBP16.87■□□□□ 0.29
SMG9-210ENST00000600097 MLLT10P55197 1068 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 AP1B1Q10567 949 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 GTF2H3Q13889 308 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 PDK1Q15118 436 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 KLHL35Q6PF15 583 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 FAM92BQ6ZTR7 304 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 CPNE8Q86YQ8 564 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 PLD5Q8N7P1 536 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 RNF31Q96EP0 1072 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 BRD8Q9H0E9 1235 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 CBX8Q9HC52 389 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 LRRC4CQ9HCJ2 640 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 SEMA5BQ9P283 1151 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 RARRES3Q9UL19 164 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 CAPN11Q9UMQ6 739 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 LUC7L2Q9Y383 392 aaKnown RBP16.87■□□□□ 0.29
SMG9-210ENST00000600097 HEY1Q9Y5J3 304 aa16.87■□□□□ 0.29
SMG9-210ENST00000600097 H2AFZP0C0S5 128 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 PBX1P40424 430 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 TMEM115Q12893 351 aaPredicted RBP16.86■□□□□ 0.29
SMG9-210ENST00000600097 TUBB3Q13509 450 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 SEMA5AQ13591 1074 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 PCSK7Q16549 785 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 KHDC1Q4VXA5 237 aaKnown RBP16.86■□□□□ 0.29
SMG9-210ENST00000600097 H2AFVQ71UI9 128 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 C11orf96Q7Z7L8 435 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 TMEM135Q86UB9 458 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 VSIG1Q86XK7 387 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 TRAPPC5Q8IUR0 188 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 SIDT2Q8NBJ9 832 aaKnown RBP16.86■□□□□ 0.29
SMG9-210ENST00000600097 GDAP1Q8TB36 358 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 BRSK1Q8TDC3 778 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.86■□□□□ 0.29
SMG9-210ENST00000600097 CT55Q8WUE5 264 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 CPLX3Q8WVH0 158 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 CTNNBL1Q8WYA6 563 aaPredicted RBP16.86■□□□□ 0.29
SMG9-210ENST00000600097 RAPGEF5Q92565 580 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 TADA1Q96BN2 335 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 SLC41A2Q96JW4 573 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 TTC25Q96NG3 672 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 AGAP3Q96P47 875 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 GPR87Q9BY21 358 aa16.86■□□□□ 0.29
SMG9-210ENST00000600097 USP9XQ93008 2570 aaPredicted RBP16.85■□□□□ 0.29
SMG9-210ENST00000600097 LRRD1A4D1F6 860 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 BLACEA4D250 179 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 PPP1R12AO14974 1030 aaPredicted RBP16.85■□□□□ 0.29
SMG9-210ENST00000600097 VPS4BO75351 444 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 NDST3O95803 873 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 FECHP22830 423 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 TPM4P67936 248 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 ACY1Q03154 408 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 IQCB1Q15051 598 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 SLC9A4Q6AI14 798 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 KMT5CQ86Y97 462 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 LURAP1LQ8IV03 231 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 EFCAB3Q8N7B9 438 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 THAP4Q8WY91 577 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 MAK16Q9BXY0 300 aaKnown RBP16.85■□□□□ 0.29
SMG9-210ENST00000600097 CEP41Q9BYV8 373 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 ZCCHC2Q9C0B9 1178 aaKnown RBP16.85■□□□□ 0.29
SMG9-210ENST00000600097 ACTL8Q9H568 366 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 TRIM10Q9UDY6 481 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 NENFQ9UMX5 172 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 VPS4AQ9UN37 437 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 WDR37Q9Y2I8 494 aa16.85■□□□□ 0.29
SMG9-210ENST00000600097 IGHV5-51A0A0C4DH38 117 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 TTLL8A6PVC2 850 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 APOL1O14791 398 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 TIAF1O95411 115 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 ZFXP17010 805 aaPredicted RBP16.84■□□□□ 0.29
SMG9-210ENST00000600097 HMGCLP35914 325 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 FANCCQ00597 558 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 DMPKQ09013 629 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 UGT8Q16880 541 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 ATP13A5Q4VNC0 1218 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 C4orf17Q53FE4 359 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 ZDHHC20Q5W0Z9 365 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 PWWP2BQ6NUJ5 590 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 AMZ2Q86W34 360 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 GALNT11Q8NCW6 608 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 DTX3LQ8TDB6 740 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 CD180Q99467 661 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 TRABDQ9H4I3 376 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMG9-210ENST00000600097 TMPRSS11EQ9UL52 423 aa16.84■□□□□ 0.29
SMG9-210ENST00000600097 SPTAN1Q13813 2472 aaKnown RBP16.84■□□□□ 0.29
SMG9-210ENST00000600097 MT-CYBP00156 380 aaPredicted RBP16.83■□□□□ 0.28
SMG9-210ENST00000600097 FOLR1P15328 257 aa16.83■□□□□ 0.28
SMG9-210ENST00000600097 PTPN4P29074 926 aa16.83■□□□□ 0.28
SMG9-210ENST00000600097 ARL4DP49703 201 aa16.83■□□□□ 0.28
SMG9-210ENST00000600097 UBASH3AP57075 661 aa16.83■□□□□ 0.28
SMG9-210ENST00000600097 RPS15P62841 145 aaKnown RBP16.83■□□□□ 0.28
SMG9-210ENST00000600097 PDE1BQ01064 536 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms