RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.73■■■□□ 2.03
SSBP4-206ENST00000599699 BPTFQ12830 3046 aa27.73■■■□□ 2.03
SSBP4-206ENST00000599699 EPG5Q9HCE0 2579 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 AGAP14A8MT82 685 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 KCNJ13O60928 360 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 PHF2O75151 1096 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 MPOP05164 745 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 CDKN1CP49918 316 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-206ENST00000599699 DRG2P55039 364 aaKnown RBP27.72■■■□□ 2.03
SSBP4-206ENST00000599699 CACNG1Q06432 222 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 NR1D2Q14995 579 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 MICALCLQ6ZW33 695 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 USP53Q70EK8 1073 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 B3GNT8Q7Z7M8 397 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 SERPINA9Q86WD7 417 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 TRIM48Q8IWZ4 208 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 BEND7Q8N7W2 519 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-206ENST00000599699 HEXDCQ8WVB3 486 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 TMEM74Q96NL1 305 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 RANBP9Q96S59 729 aa27.72■■■□□ 2.03
SSBP4-206ENST00000599699 NAPGQ99747 312 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-206ENST00000599699 SARS2Q9NP81 518 aaKnown RBP27.72■■■□□ 2.03
SSBP4-206ENST00000599699 DNMT3AQ9Y6K1 912 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-206ENST00000599699 ZFC3H1O60293 1989 aaKnown RBP27.71■■■□□ 2.03
SSBP4-206ENST00000599699 TMX2-CTNND1H3BSU7 103 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 AP3B1O00203 1094 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 PRSS56P0CW18 603 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 ARSDP51689 593 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 PDX1P52945 283 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 INHBCP55103 352 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 GABREP78334 506 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 C3orf38Q5JPI3 329 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 CHCHD2P9Q5T1J5 151 aaPredicted RBP27.71■■■□□ 2.03
SSBP4-206ENST00000599699 TSTD2Q5T7W7 516 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 FOXR1Q6PIV2 292 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 NLRP9Q7RTR0 991 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 PIM3Q86V86 326 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 AVL9Q8NBF6 648 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 SH3KBP1Q96B97 665 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 AHCYL2Q96HN2 611 aaKnown RBP27.71■■■□□ 2.03
SSBP4-206ENST00000599699 STRADBQ9C0K7 418 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 ZNF106Q9H2Y7 1883 aaKnown RBP27.71■■■□□ 2.03
SSBP4-206ENST00000599699 RDH14Q9HBH5 336 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 ZDHHC3Q9NYG2 299 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 SCHIP1Q9P0W5 487 aaPredicted RBP27.71■■■□□ 2.03
SSBP4-206ENST00000599699 CPNE7Q9UBL6 633 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 TCAF1Q9Y4C2 921 aa27.71■■■□□ 2.03
SSBP4-206ENST00000599699 OR51F1A6NGY5 319 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 CPNE6O95741 557 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 CAPNS1P04632 268 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 TPSB2P20231 275 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 ACRV1P26436 265 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 CDK16Q00536 496 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 TPSAB1Q15661 275 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 NKAIN2Q5VXU1 208 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 GRK7Q8WTQ7 553 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 HDAC10Q969S8 669 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 CAPZA3Q96KX2 299 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 POLR1BQ9H9Y6 1135 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 BFARQ9NZS9 450 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 DKK4Q9UBT3 224 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 FAM8A1Q9UBU6 413 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 SLC2A6Q9UGQ3 507 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 SATB2Q9UPW6 733 aa27.7■■■□□ 2.02
SSBP4-206ENST00000599699 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-206ENST00000599699 IGHV1OR21-1A0A087WYE8 117 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 TRBV5-4A0A0C4DH59 114 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 CCDC162PA2VCL2 907 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 CTAGE9A4FU28 777 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 BRINP1O60477 761 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 VIPP01282 170 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 ATP1B2P14415 290 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-206ENST00000599699 CD1CP29017 333 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 HALP42357 657 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 FNTAP49354 379 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 SARNPP82979 210 aaKnown RBP27.69■■■□□ 2.02
SSBP4-206ENST00000599699 PCID2Q5JVF3 399 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 PHF19Q5T6S3 580 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 PROSER1Q86XN7 944 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 PIANPQ8IYJ0 282 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 OR13J1Q8NGT2 312 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 OR6P1Q8NGX9 317 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 OR10G6Q8NH81 332 aa27.69■■■□□ 2.02
SSBP4-206ENST00000599699 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.69■■■□□ 2.02
SSBP4-206ENST00000599699 CCDC97Q96F63 343 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-206ENST00000599699 LDHAL6BQ9BYZ2 381 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-206ENST00000599699 FREM2Q5SZK8 3169 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 PRR19A6NJB7 356 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 PSMA3P25788 255 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 MAPK9P45984 424 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 LSSP48449 732 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 NPY2RP49146 381 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 CRADDP78560 199 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 DMPKQ09013 629 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 NFE2L1Q14494 772 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 BCL7AQ4VC05 210 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 AGAP9Q5VTM2 703 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 PAPD7Q5XG87 772 aaKnown RBP27.68■■■□□ 2.02
SSBP4-206ENST00000599699 ABRAXAS1Q6UWZ7 409 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 WASH2PQ6VEQ5 465 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms