RNA–Protein interactions for RNA: ENST00000599560.5

NUP62-216, Transcript of nucleoporin 62, human

TSL 2

Gene NUP62, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-216	ENST00000599560	UBXN4	Q92575	508 aa		11.85	□□□□□ -0.51
NUP62-216	ENST00000599560	LRFN5	Q96NI6	719 aa		11.85	□□□□□ -0.51
NUP62-216	ENST00000599560	WDR77	Q9BQA1	342 aa	Predicted RBP	11.85	□□□□□ -0.51
NUP62-216	ENST00000599560	TUBB2B	Q9BVA1	445 aa		11.85	□□□□□ -0.51
NUP62-216	ENST00000599560	TMUB1	Q9BVT8	246 aa		11.85	□□□□□ -0.51
NUP62-216	ENST00000599560	KCND1	Q9NSA2	647 aa		11.85	□□□□□ -0.51
NUP62-216	ENST00000599560	NOCT	Q9UK39	431 aa	Known RBP	11.85	□□□□□ -0.51
NUP62-216	ENST00000599560	NEU2	Q9Y3R4	380 aa		11.85	□□□□□ -0.51
NUP62-216	ENST00000599560		A0A1W2PQJ5	194 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	TCRBV5S1A1T	A0A578	114 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	PDZK1P1	A8MUH7	402 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	BIN1	O00499	593 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	ATMIN	O43313	823 aa	Predicted RBP	11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	KLK3	P07288	261 aa	Predicted RBP	11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	ATXN8OS	P0DMR3	200 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	KRT3	P12035	628 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	ERCC2	P18074	760 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	RENBP	P51606	427 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	TDGF1P3	P51864	188 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	GSDMD	P57764	484 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	BPIFB4	P59827	614 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	RPL7A	P62424	266 aa	Known RBP	11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	FMO1	Q01740	532 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	NCF4	Q15080	339 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	TDRD12	Q587J7	1177 aa	Known RBP	11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	ARMC12	Q5T9G4	340 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	BPHL	Q86WA6	291 aa	Predicted RBP	11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	ZNF547	Q8IVP9	402 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	SYTL1	Q8IYJ3	562 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	AVL9	Q8NBF6	648 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	PEBP4	Q96S96	227 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	KCTD15	Q96SI1	283 aa	Predicted RBP	11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	PCDHB18P	Q96TA0	734 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	MGME1	Q9BQP7	344 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	TLR10	Q9BXR5	811 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	CARD9	Q9H257	536 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	GSX1	Q9H4S2	264 aa	Predicted RBP	11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	RMI1	Q9H9A7	625 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	CHST11	Q9NPF2	352 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	POT1	Q9NUX5	634 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560	TMEM63C	Q9P1W3	806 aa		11.84	□□□□□ -0.51
NUP62-216	ENST00000599560		A0A0J9YYE9	177 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560		A0A1W2PQ67	120 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	BICDL2	A1A5D9	508 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	GTPBP10	A4D1E9	387 aa	Known RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	EEF2K	O00418	725 aa	Known RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	KCNN4	O15554	427 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	LDB2	O43679	373 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	CNOT3	O75175	753 aa	Known RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	MTX2	O75431	263 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	JRK	O75564	520 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	WISP2	O76076	250 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	PRL	P01236	227 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	TRBC1	P01850	177 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	ALPP	P05187	535 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	SSTR2	P30874	369 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	TSFM	P43897	325 aa	Known RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	ARCN1	P48444	511 aa	Known RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	HSD11B2	P80365	405 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	KHDC1	Q4VXA5	237 aa	Known RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	VWA2	Q5GFL6	755 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	ZNF385C	Q66K41	422 aa	Predicted RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	CYB5D1	Q6P9G0	228 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	ABRAXAS1	Q6UWZ7	409 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	ADGRG6	Q86SQ4	1221 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	MSANTD4	Q8NCY6	345 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	OR1L3	Q8NH93	324 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	NANOS1	Q8WY41	292 aa	Known RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	CLIP3	Q96DZ5	547 aa		11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	NAA15	Q9BXJ9	866 aa	Known RBP	11.83	□□□□□ -0.52
NUP62-216	ENST00000599560	RTTN	Q86VV8	2226 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	TLCD2	A6NGC4	264 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	CHUK	O15111	745 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	PYGL	P06737	847 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	ZNF30	P17039	623 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	ZNF7	P17097	686 aa	Predicted RBP	11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	ADORA2A-AS1	P86434	159 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	OTUD4	Q01804	1114 aa	Known RBP	11.82	□□□□□ -0.52
NUP62-216	ENST00000599560		Q0VFX4	171 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	CDC16	Q13042	620 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	INSC	Q1MX18	579 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	SMTNL2	Q2TAL5	461 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	ZFYVE27	Q5T4F4	411 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	PLEKHA7	Q6IQ23	1121 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	TRIM72	Q6ZMU5	477 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	RFX8	Q6ZV50	586 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	RAB43	Q86YS6	212 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	CLEC1A	Q8NC01	280 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	CATSPER1	Q8NEC5	780 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	PPP4R1	Q8TF05	950 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	CPT1B	Q92523	772 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	EID2B	Q96D98	161 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	CNDP1	Q96KN2	507 aa		11.82	□□□□□ -0.52
NUP62-216	ENST00000599560	DHX35	Q9H5Z1	703 aa	Known RBP	11.82	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms