RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 LYPLAL1Q5VWZ2 237 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 OGFOD3Q6PK18 319 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 EFL1Q7Z2Z2 1120 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 ZNF547Q8IVP9 402 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 OTUD6BQ8N6M0 293 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 BBOF1Q8ND07 529 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 MNS1Q8NEH6 495 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 GPR156Q8NFN8 814 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 IFI44Q8TCB0 444 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 NAT6Q93015 286 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 ZNF669Q96BR6 464 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 SGF29Q96ES7 293 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 ERP44Q9BS26 406 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 DPH5Q9H2P9 285 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 CATSPERZQ9NTU4 200 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 PCDHGA1Q9Y5H4 931 aa19.37■□□□□ 0.69
SHKBP1-214ENST00000597396 BPTFQ12830 3046 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 FAM237BA0A1B0GVD1 139 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 NOBOXO60393 691 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 ATP1B2P14415 290 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 CLCNKAP51800 687 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 B4GALNT1Q00973 533 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 ILKQ13418 452 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 BIRC2Q13490 618 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 ITIH4Q14624 930 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 C14orf28Q4W4Y0 310 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 AARS2Q5JTZ9 985 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 HIBCHQ6NVY1 386 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 GUSBP11Q6P575 273 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 AMZ2Q86W34 360 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 CCDC97Q96F63 343 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 SGSM3Q96HU1 749 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 SIGLEC10Q96LC7 697 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 RAB17Q9H0T7 212 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 SLC23A2Q9UGH3 650 aa19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 UTP11Q9Y3A2 253 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 DNMT3AQ9Y6K1 912 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-214ENST00000597396 UNC13CQ8NB66 2214 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 IGLV3-16A0A075B6K0 115 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 EME2A4GXA9 379 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 CD3EAPO15446 510 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 KCNJ13O60928 360 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 POP7O75817 140 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 VAPBO95292 243 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 TRIM16O95361 564 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 SLC2A4P14672 509 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 DHX9Q08211 1270 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 FOXC1Q12948 553 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 CALCOCO2Q13137 446 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 BBS9Q3SYG4 887 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 BCL7AQ4VC05 210 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 KIAA0930Q6ICG6 404 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 C8orf74Q6P047 294 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 CERS6Q6ZMG9 384 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 C11orf96Q7Z7L8 435 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 SFTPA2Q8IWL1 248 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 NAGSQ8N159 534 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 PDIK1LQ8N165 341 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 BEND7Q8N7W2 519 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 OR6C4Q8NGE1 309 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 NAT14Q8WUY8 206 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 STAMBPL1Q96FJ0 436 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 TBC1D29Q9UFV1 150 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 RPS6KL1Q9Y6S9 549 aa19.35■□□□□ 0.69
SHKBP1-214ENST00000597396 CTAGE15A4D2H0 777 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 PDZK1P1A8MUH7 402 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 CTAGE8P0CG41 777 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 CDK4P11802 303 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 IDSP22304 550 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 NSG1P42857 185 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 PRLHRP49683 370 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 MAZP56270 477 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 ARL4CP56559 192 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 HIF1AQ16665 826 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 ANKRD20A4Q4UJ75 823 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 DHRS13Q6UX07 377 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 CTAGE6Q86UF2 777 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 CTAGE4Q8IX94 777 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 MAPK15Q8TD08 544 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 PATE1Q8WXA2 126 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 ADAMTS14Q8WXS8 1223 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 TRIM56Q9BRZ2 755 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 WHRNQ9P202 907 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 FAM8A1Q9UBU6 413 aa19.34■□□□□ 0.69
SHKBP1-214ENST00000597396 CEP295Q9C0D2 2601 aa19.33■□□□□ 0.69
SHKBP1-214ENST00000597396 TRBV23OR9-2A0A075B6M9 112 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 BANF1O75531 89 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 USP1O94782 785 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 DKK1O94907 266 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 POLBP06746 335 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 GP1BAP07359 652 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 F3P13726 295 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 PGAM1P18669 254 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 TTPAP49638 278 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 E2F1Q01094 437 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 HLTFQ14527 1009 aaKnown RBP eCLIP19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 SEMA3AQ14563 771 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 SMAD1Q15797 465 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 SEPT7Q16181 437 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 PERM1Q5SV97 790 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms