RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ST14Q9Y5Y6 855 aa14.82□□□□□ -0.04
TRIM28-207ENST00000597136 CXorf49A8MYA2 514 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 TNFRSF10CO14798 259 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 GIPC1O14908 333 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 RASGRP1O95267 797 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 TNFP01375 233 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 PYGLP06737 847 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 MC4RP32245 332 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 THOC5Q13769 683 aaKnown RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 EFTUD2Q15029 972 aaKnown RBP eCLIP14.81□□□□□ -0.043e-14■■■■■ 92.3
TRIM28-207ENST00000597136 TEDDM1Q5T9Z0 273 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 HDXQ7Z353 690 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 NAXDQ8IW45 347 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 ZNF548Q8NEK5 533 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 DEFB124Q8NES8 71 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 RHBDD1Q8TEB9 315 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 NAT14Q8WUY8 206 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 CCDC97Q96F63 343 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 LRRC61Q9BV99 259 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 SLC13A1Q9BZW2 595 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 IARS2Q9NSE4 1012 aaKnown RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 ATXN10Q9UBB4 475 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 NFS1Q9Y697 457 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 DGKBQ9Y6T7 804 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 CACNA1AO00555 2505 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 TRIM38O00635 465 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 CD3EAPO15446 510 aaKnown RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 FFAR2O15552 330 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 AQP9O43315 295 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 DNAJC6O75061 913 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 SRP72O76094 671 aaKnown RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 PRAMEF1O95521 474 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 MYF5P13349 255 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 KELP23276 732 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 FOXN2P32314 431 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 ADGRG6Q86SQ4 1221 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 CNTN4Q8IWV2 1026 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 GPR150Q8NGU9 434 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 OR2W6PQ8NHA6 318 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 DTX3LQ8TDB6 740 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 SCARF2Q96GP6 870 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 CCDC77Q9BR77 488 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 FAM167BQ9BTA0 163 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 OR2AG1Q9H205 316 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 ASB8Q9H765 288 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 CARS2Q9HA77 564 aaKnown RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 TRIM39Q9HCM9 518 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 ZNF446Q9NWS9 450 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 ZFATQ9P243 1243 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 VPS18Q9P253 973 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 MARCH4Q9P2E8 410 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-207ENST00000597136 SLC30A1Q9Y6M5 507 aa14.81□□□□□ -0.04
TRIM28-207ENST00000597136 EXOC1LA0A1B0GW35 172 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 YY2O15391 372 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 CBFA2T3O75081 653 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 CTSEP14091 401 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 ZNF8P17098 575 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-207ENST00000597136 GNPDA1P46926 289 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 CACNG1Q06432 222 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 NFATC2Q13469 925 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 SUZ12Q15022 739 aaKnown RBP14.8□□□□□ -0.04
TRIM28-207ENST00000597136 KLHL38Q2WGJ6 581 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 DEFB133Q30KQ1 61 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 FASTKD1Q53R41 847 aaKnown RBP14.8□□□□□ -0.04
TRIM28-207ENST00000597136 ZNF470Q6ECI4 717 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 LRRC6Q86X45 466 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 CILP2Q8IUL8 1156 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 SFTPA2Q8IWL1 248 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 CTAGE3PQ8IX95 158 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 PIANPQ8IYJ0 282 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 CALML6Q8TD86 181 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 CDKL2Q92772 493 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 ZIM3Q96PE6 472 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 VPS35Q96QK1 796 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 CATSPERZQ9NTU4 200 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 SLC17A6Q9P2U8 582 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 SPASTQ9UBP0 616 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 ZNHIT2Q9UHR6 403 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 PCOLCE2Q9UKZ9 415 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 PCM1Q15154 2024 aa14.8□□□□□ -0.04
TRIM28-207ENST00000597136 AGAP14A8MT82 685 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 H3BM21 787 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 YKT6O15498 198 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 FLRT2O43155 660 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 TCEA3O75764 348 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 ITGALP20701 1170 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 AK4P27144 223 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-207ENST00000597136 EIF3BP55884 814 aaKnown RBP14.79□□□□□ -0.04
TRIM28-207ENST00000597136 IFFO1Q0D2I5 559 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 TMEM115Q12893 351 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-207ENST00000597136 NAB1Q13506 487 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 GPR33Q49SQ1 333 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 PYCR3Q53H96 274 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 ZRANB3Q5FWF4 1079 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 GPRC6AQ5T6X5 926 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 MRNIPQ6NTE8 343 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 SNX20Q7Z614 316 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 NRROSQ86YC3 692 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 DENND6AQ8IWF6 608 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 LMNTD2Q8IXW0 634 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms