RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 LILRA3Q8N6C8 439 aaPredicted RBP15.29■□□□□ 0.04
SMCO4-206ENST00000596676 GPR161Q8N6U8 529 aaKnown RBP15.29■□□□□ 0.04
SMCO4-206ENST00000596676 ZNF548Q8NEK5 533 aaPredicted RBP15.29■□□□□ 0.04
SMCO4-206ENST00000596676 FBF1Q8TES7 1133 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 LPGAT1Q92604 370 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMCO4-206ENST00000596676 DCUN1D1Q96GG9 259 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 TTC25Q96NG3 672 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 OR2M4Q96R27 311 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 TXLNGYQ9BZA5 131 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 ZDHHC5Q9C0B5 715 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 PHACTR1Q9C0D0 580 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 P2RY12Q9H244 342 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 FAM8A1Q9UBU6 413 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 FBXO5Q9UKT4 447 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 KCNK6Q9Y257 313 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 DNAH14Q0VDD8 3507 aa15.29■□□□□ 0.04
SMCO4-206ENST00000596676 PIKFYVEQ9Y2I7 2098 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 UBA6A0AVT1 1052 aaPredicted RBP15.28■□□□□ 0.04
SMCO4-206ENST00000596676 FFAR2O15552 330 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 NDUFS3O75489 264 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 POP7O75817 140 aaKnown RBP15.28■□□□□ 0.04
SMCO4-206ENST00000596676 ACSL3O95573 720 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 CER1O95813 267 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 EML2O95834 649 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 GIMD1P0DJR0 217 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 MYF5P13349 255 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 EPHA8P29322 1005 aaPredicted RBP15.28■□□□□ 0.04
SMCO4-206ENST00000596676 FMO4P31512 558 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 PGGT1BP53609 377 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 MGAT5Q09328 741 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 GTF2H3Q13889 308 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 ITIH4Q14624 930 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 CTSL3PQ5NE16 218 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 LYPLAL1Q5VWZ2 237 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 MRNIPQ6NTE8 343 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 IL27RAQ6UWB1 636 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 CERS6Q6ZMG9 384 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 FAM83HQ6ZRV2 1179 aaPredicted RBP15.28■□□□□ 0.04
SMCO4-206ENST00000596676 SDCCAG8Q86SQ7 713 aaPredicted RBP15.28■□□□□ 0.04
SMCO4-206ENST00000596676 LRRTM4Q86VH4 590 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 SAP25Q8TEE9 199 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 MRRFQ96E11 262 aaKnown RBP15.28■□□□□ 0.04
SMCO4-206ENST00000596676 SLC13A1Q9BZW2 595 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 GALPQ9UBC7 116 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 GULP1Q9UBP9 304 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 BTBD3Q9Y2F9 522 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 DNAJC16Q9Y2G8 782 aa15.28■□□□□ 0.04
SMCO4-206ENST00000596676 FAM186AA6NE01 2351 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 ASCC3Q8N3C0 2202 aaKnown RBP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 FAM155BO75949 473 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 AHSGP02765 367 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 CTSEP14091 401 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 ZNF7P17097 686 aaPredicted RBP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 OGNP20774 298 aaKnown RBP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 TTPAP49638 278 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 EIF3BP55884 814 aaKnown RBP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 HNRNPKP61978 463 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 TUBB4BP68371 445 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 FRG1Q14331 258 aaKnown RBP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 DEFB133Q30KQ1 61 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 SLC30A9Q6PML9 568 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 PACS1Q6VY07 963 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 RELL1Q8IUW5 271 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 C2CD4AQ8NCU7 369 aaPredicted RBP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 ACVR1CQ8NER5 493 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 FAM136AQ96C01 138 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 BIRC8Q96P09 236 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 FAM167BQ9BTA0 163 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 EPB41L4BQ9H329 900 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 TMEM9BQ9NQ34 198 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 KLC4Q9NSK0 619 aa15.27■□□□□ 0.04
SMCO4-206ENST00000596676 SPATS2LQ9NUQ6 558 aaKnown RBP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 DNAAF2Q9NVR5 837 aaKnown RBP15.27■□□□□ 0.04
SMCO4-206ENST00000596676 ARID1BQ8NFD5 2236 aaPredicted RBP15.27■□□□□ 0.03
SMCO4-206ENST00000596676 TRBV23OR9-2A0A075B6M9 112 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.26■□□□□ 0.03
SMCO4-206ENST00000596676 FAM159BA6NKW6 160 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 KMOO15229 486 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 YY2O15391 372 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 AQP9O43315 295 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 NIPSNAP2O75323 286 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 RALBP11234 206 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 CD59P13987 128 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 NSG1P42857 185 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 ARRB1P49407 418 aaPredicted RBP15.26■□□□□ 0.03
SMCO4-206ENST00000596676 CCT8P50990 548 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 PMS2P54278 862 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 NFE2L1Q14494 772 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 BRD3Q15059 726 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 KBTBD12Q3ZCT8 623 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 AARS2Q5JTZ9 985 aaKnown RBP15.26■□□□□ 0.03
SMCO4-206ENST00000596676 RBM20Q5T481 1227 aaKnown RBP15.26■□□□□ 0.03
SMCO4-206ENST00000596676 WDR93Q6P2C0 686 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 TAF8Q7Z7C8 310 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 CNTN4Q8IWV2 1026 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 OXR1Q8N573 874 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 EIF1ADQ8N9N8 165 aaKnown RBP15.26■□□□□ 0.03
SMCO4-206ENST00000596676 GPBAR1Q8TDU6 330 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 ATXN7L3BQ96GX2 97 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms