RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TLE3Q04726 772 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 NFATC2Q13469 925 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 GTF2H3Q13889 308 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 C16orf72Q14CZ0 275 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 CCNG2Q16589 344 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 INSCQ1MX18 579 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 MAP9Q49MG5 647 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 NKAIN2Q5VXU1 208 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 TMEM71Q6P5X7 295 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 WDR74Q6RFH5 385 aaPredicted RBP12.84□□□□□ -0.35
USE1-207ENST00000596136 SPACA3Q8IXA5 215 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 OR13C4Q8NGS5 318 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 TTC25Q96NG3 672 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 SLC38A3Q99624 504 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 CMKLR1Q99788 373 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.84□□□□□ -0.35
USE1-207ENST00000596136 EPB41L1Q9H4G0 881 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 STN1Q9H668 368 aaKnown RBP12.84□□□□□ -0.35
USE1-207ENST00000596136 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 ZNF624Q9P2J8 865 aaPredicted RBP12.84□□□□□ -0.35
USE1-207ENST00000596136 FKBPLQ9UIM3 349 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 DRG1Q9Y295 367 aaKnown RBP12.84□□□□□ -0.35
USE1-207ENST00000596136 ZKSCAN5Q9Y2L8 839 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 LOXL2Q9Y4K0 774 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 MGAQ8IWI9 3026 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 LOC400499M0QZD8 3231 aa12.84□□□□□ -0.35
USE1-207ENST00000596136 TRBV5-4A0A0C4DH59 114 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 KLHL33A6NCF5 533 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 MROH6A6NGR9 719 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 SGTAO43765 313 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 NRDCO43847 1150 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 POP7O75817 140 aaKnown RBP12.83□□□□□ -0.36
USE1-207ENST00000596136 THRAP10827 490 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 VCLP18206 1134 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 FDFT1P37268 417 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 GPR33Q49SQ1 333 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 TMEM220Q6QAJ8 160 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 SNX20Q7Z614 316 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 LINC00523Q86TU6 105 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 AMZ2Q86W34 360 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 TRAPPC5Q8IUR0 188 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 RBM12BQ8IXT5 1001 aaKnown RBP12.83□□□□□ -0.36
USE1-207ENST00000596136 OR10G6Q8NH81 332 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 C1orf54Q8WWF1 131 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 CCDC97Q96F63 343 aaPredicted RBP12.83□□□□□ -0.36
USE1-207ENST00000596136 LINC00615Q96LM1 132 aaPredicted RBP12.83□□□□□ -0.36
USE1-207ENST00000596136 OSGEPL1Q9H4B0 414 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 PRORYQ9H606 182 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 ASB8Q9H765 288 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 ETNK1Q9HBU6 452 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 NLE1Q9NVX2 485 aaPredicted RBP12.83□□□□□ -0.36
USE1-207ENST00000596136 ZNF148Q9UQR1 794 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 DNAJC16Q9Y2G8 782 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 CACNA1GO43497 2377 aa12.83□□□□□ -0.36
USE1-207ENST00000596136 IGLV3-16A0A075B6K0 115 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 DUX1O43812 170 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 JMJD7P0C870 316 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 HGFP14210 728 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 TPH1P17752 444 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 SLC5A2P31639 672 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 CCDC173Q0VFZ6 552 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 SEMA5AQ13591 1074 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 LONRF2Q1L5Z9 754 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 PLA2G4EQ3MJ16 856 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 BCL7AQ4VC05 210 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 PHF19Q5T6S3 580 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 METRNLQ641Q3 311 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 FOXR1Q6PIV2 292 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 XKR5Q6UX68 686 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 TMEM26Q6ZUK4 368 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 ARHGAP22Q7Z5H3 698 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 PDZD3Q86UT5 571 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 ZNF761Q86XN6 746 aaPredicted RBP12.82□□□□□ -0.36
USE1-207ENST00000596136 NXPE1Q8N323 547 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 STYXQ8WUJ0 223 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 HEXDCQ8WVB3 486 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 MAIP1Q8WWC4 291 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 KCNE4Q8WWG9 221 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 ULK4Q96C45 1275 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 CDKN2AIPNLQ96HQ2 116 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 DNAJC1Q96KC8 554 aaKnown RBP12.82□□□□□ -0.36
USE1-207ENST00000596136 CCDC74BQ96LY2 380 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 SLC40A1Q9NP59 571 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 POT1Q9NUX5 634 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 TMEM9Q9P0T7 183 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 RIMKLBQ9ULI2 386 aa12.82□□□□□ -0.36
USE1-207ENST00000596136 PIKFYVEQ9Y2I7 2098 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 MGAT4DA6NG13 374 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 OR2AG2A6NM03 316 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 PDZK1P1A8MUH7 402 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 IFNB1P01574 187 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 FGGP02679 453 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 ITIH1P19827 911 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 MSH3P20585 1137 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 ITGALP20701 1170 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 RPL10P27635 214 aaKnown RBP12.81□□□□□ -0.36
USE1-207ENST00000596136 ETV5P41161 510 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 CDH17Q12864 832 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 CLCA4Q14CN2 919 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 FAM83HQ6ZRV2 1179 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms