RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 KIF18AQ8NI77 898 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 ZNF592Q92610 1267 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 SNF8Q96H20 258 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 MED19A0JLT2 244 aaPredicted RBP25.36■■□□□ 1.65
TRIM28-204ENST00000594806 PRR19A6NJB7 356 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 OR2AG2A6NM03 316 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 EFCAB8A8MWE9 144 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 F8W8V4 182 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 ZW10O43264 779 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 POP7O75817 140 aaKnown RBP25.36■■□□□ 1.65
TRIM28-204ENST00000594806 AP2A2O94973 939 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 GSTM1P09488 218 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 MYF5P13349 255 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 F3P13726 295 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 IDSP22304 550 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 NMBRP28336 390 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 NSG1P42857 185 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 CDKN1CP49918 316 aaPredicted RBP25.36■■□□□ 1.65
TRIM28-204ENST00000594806 B4GALNT1Q00973 533 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 GSTM4Q03013 218 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 FOXC1Q12948 553 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 SMAD1Q15797 465 aaKnown RBP25.36■■□□□ 1.65
TRIM28-204ENST00000594806 CCDC157Q569K6 752 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 WASH2PQ6VEQ5 465 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 PACS1Q6VY07 963 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 PIANPQ8IYJ0 282 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 MPP5Q8N3R9 675 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 SGF29Q96ES7 293 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 VPS37BQ9H9H4 285 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 WASH6PQ9NQA3 447 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 SLC23A2Q9UGH3 650 aa25.36■■□□□ 1.65
TRIM28-204ENST00000594806 KIR2DS5A0A0G2JLQ3 304 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 A0A0G2JNG1 304 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 KIR2DS3K7RE56 304 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 PRLHRP49683 370 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 SHC2P98077 582 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 C2orf54Q08AI8 447 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 KIR2DS5Q14953 304 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 DBN1Q16643 649 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 DNAJC21Q5F1R6 531 aaKnown RBP25.35■■□□□ 1.65
TRIM28-204ENST00000594806 FNBP1LQ5T0N5 605 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 KIAA0930Q6ICG6 404 aaPredicted RBP25.35■■□□□ 1.65
TRIM28-204ENST00000594806 IYDQ6PHW0 289 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 DHRS13Q6UX07 377 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 TMEM135Q86UB9 458 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 TMPRSS12Q86WS5 348 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 ARL14Q8N4G2 192 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 MFSD3Q96ES6 412 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 TRIM51Q9BSJ1 452 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 NAT9Q9BTE0 207 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 ABCG4Q9H172 646 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 OSGEPL1Q9H4B0 414 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 CATSPERZQ9NTU4 200 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 TBC1D29Q9UFV1 150 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 PTPRBP23467 1997 aa25.35■■□□□ 1.65
TRIM28-204ENST00000594806 C17orf113A0A1B0GUU1 675 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 A6NCN8 305 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 MGAT4DA6NG13 374 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 OR51F1A6NGY5 319 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 SEC31AO94979 1220 aaKnown RBP25.34■■□□□ 1.65
TRIM28-204ENST00000594806 FASLGP48023 281 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 TTPAP49638 278 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 BIRC2Q13490 618 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 AGAP9Q5VTM2 703 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 HIBCHQ6NVY1 386 aaPredicted RBP25.34■■□□□ 1.65
TRIM28-204ENST00000594806 TMPRSS7Q7RTY8 843 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 PDIK1LQ8N165 341 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 SFRP1Q8N474 314 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 CHCHD4Q8N4Q1 142 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 MAPK15Q8TD08 544 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 SIGLEC10Q96LC7 697 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 ERP44Q9BS26 406 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 STN1Q9H668 368 aaKnown RBP25.34■■□□□ 1.65
TRIM28-204ENST00000594806 LRIT1Q9P2V4 623 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 WASF3Q9UPY6 502 aa25.34■■□□□ 1.65
TRIM28-204ENST00000594806 FAM221BA6H8Z2 402 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 CD3EAPO15446 510 aaKnown RBP25.33■■□□□ 1.65
TRIM28-204ENST00000594806 OPA1O60313 960 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 PLA2G4EQ3MJ16 856 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 ABRAXAS1Q6UWZ7 409 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 DET1Q7L5Y6 550 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 MNS1Q8NEH6 495 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 OR2L2Q8NH16 312 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 ACSL5Q9ULC5 683 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 DNAJC16Q9Y2G8 782 aa25.33■■□□□ 1.65
TRIM28-204ENST00000594806 RHPN2P1A8MT19 583 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 PFDN6O15212 129 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 RAD51CO43502 376 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 SGTAO43765 313 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 SNX2O60749 519 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 USP1O94782 785 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 VAPBO95292 243 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 PRSS56P0CW18 603 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 GPR3P46089 330 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 ITGA8P53708 1063 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 NR1D2Q14995 579 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 ANKRD20A4Q4UJ75 823 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 PERM1Q5SV97 790 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 MRNIPQ6NTE8 343 aa25.32■■□□□ 1.64
TRIM28-204ENST00000594806 ZNF438Q7Z4V0 828 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms