RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ASGR1P07306 291 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 FCGR1AP12314 374 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 HOXD9P28356 352 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 CTGFP29279 349 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 POLR2IP36954 125 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 HK3P52790 923 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 XKR7Q5GH72 579 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 CLLU1OSQ5K130 101 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 PSAPL1Q6NUJ1 521 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 SLC2A7Q6PXP3 512 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 AFTPHQ6ULP2 937 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 PTRH1Q86Y79 214 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 CDYL2Q8N8U2 506 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 SOCS4Q8WXH5 440 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 TLR8Q9NR97 1041 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 TRMT13Q9NUP7 481 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 TSR3Q9UJK0 312 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 LEF1Q9UJU2 399 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 RIMKLBQ9ULI2 386 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 DOLKQ9UPQ8 538 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 SNAP29O95721 258 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 IGLV3-27P01718 113 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 ZNF182P17025 639 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 RPS9P46781 194 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 PLCL1Q15111 1095 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 PTPRRQ15256 657 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 NEDD8Q15843 81 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 RTN4RL1Q86UN2 441 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 RALGPS2Q86X27 583 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 PIANPQ8IYJ0 282 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 FNDC5Q8NAU1 212 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 TSPEARQ8WU66 669 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 EEF1AKMT1Q8WVE0 214 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 BIRC7Q96CA5 298 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 SEPT5Q99719 369 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 NUSAP1Q9BXS6 441 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 TMEM165Q9HC07 324 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 SARS2Q9NP81 518 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 OLA1Q9NTK5 396 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 IL37Q9NZH6 218 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 PAIP2BQ9ULR5 123 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 A0A0U1RQS6 177 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 STX16O14662 325 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 SYNCRIPO60506 623 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 SERPINB7O75635 380 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 FUCA1P04066 466 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 OCM2P0CE71 109 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 OCMP0CE72 109 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 MATN1P21941 496 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 HRH2P25021 359 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 ARL1P40616 181 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 PHEXP78562 749 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 NFATC3Q12968 1075 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 BTG3Q14201 252 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 PYCR3Q53H96 274 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 CENPSQ8N2Z9 138 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 NKAPQ8N5F7 415 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 NUDT8Q8WV74 236 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 HBEGFQ99075 208 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 MGME1Q9BQP7 344 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 CINPQ9BW66 212 aaPredicted RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 YTHDF1Q9BYJ9 559 aaKnown RBP16.32■□□□□ 0.2
LIG1-206ENST00000594067 BRINP2Q9C0B6 783 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 CRISPLD1Q9H336 500 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 BPIFA1Q9NP55 256 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 INIPQ9NRY2 104 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 CD274Q9NZQ7 290 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 SUN2Q9UH99 717 aa16.32■□□□□ 0.2
LIG1-206ENST00000594067 SOBPA7XYQ1 873 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 F5H5T6 163 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 LDLRP01130 860 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 CYBAP13498 195 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 SLC6A4P31645 630 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 HLCSP50747 726 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 EEFSECP57772 596 aaKnown RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 OR4D2P58180 307 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 ADARB1P78563 741 aaKnown RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 DSC1Q08554 894 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 TBPL2Q6SJ96 375 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 GPRIN3Q6ZVF9 776 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 TBC1D21Q8IYX1 336 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 OR52B6Q8NGF0 335 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 OR56A4Q8NGH8 313 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 LINGO1Q96FE5 620 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 CNDP2Q96KP4 475 aaKnown RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 RNF145Q96MT1 663 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 TUBA1CQ9BQE3 449 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 PFDN4Q9NQP4 134 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 TMEM9Q9P0T7 183 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 FKBPLQ9UIM3 349 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 TRMT6Q9UJA5 497 aaKnown RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 FAM92AA1XBS5 289 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 K7EPI3 171 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 VPS26AO75436 327 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 MLYCDO95822 493 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 TSPAN12O95859 305 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 PKMP14618 531 aaKnown RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 ERVK-8P63133 956 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 GNA12Q03113 381 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms