RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ZNF8P17098 575 aaPredicted RBP17.03■□□□□ 0.32
RETREG3-210ENST00000590541 NELFEP18615 380 aaKnown RBP17.03■□□□□ 0.32
RETREG3-210ENST00000590541 CES1P23141 567 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 IL4RP24394 825 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 ARHGAP25P42331 645 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 CAPZBP47756 277 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 ARSEP51690 589 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 EPHB1P54762 984 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 PAFAH1B3Q15102 231 aaKnown RBP17.03■□□□□ 0.32
RETREG3-210ENST00000590541 CHRNA6Q15825 494 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 C1QL3Q5VWW1 255 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 TIGD7Q6NT04 549 aaPredicted RBP17.03■□□□□ 0.32
RETREG3-210ENST00000590541 FAM92BQ6ZTR7 304 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 FATE1Q969F0 183 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 MFRPQ9BY79 579 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 OSGEPL1Q9H4B0 414 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 PDE7BQ9NP56 450 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 SLC23A2Q9UGH3 650 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 AMACRQ9UHK6 382 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 DNPEPQ9ULA0 475 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 SRPK3Q9UPE1 567 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 CHKBQ9Y259 395 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 ZNF451Q9Y4E5 1061 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 PCDHGB7Q9Y5F8 929 aa17.03■□□□□ 0.32
RETREG3-210ENST00000590541 MFAP3LO75121 409 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 FOLR1P15328 257 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 PTGIRP43119 386 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 SPINT3P49223 89 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 DPYSL3Q14195 570 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 ZNF648Q5T619 568 aaPredicted RBP17.02■□□□□ 0.32
RETREG3-210ENST00000590541 SLC6A19Q695T7 634 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 VSIG1Q86XK7 387 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 TRIM48Q8IWZ4 208 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 RHOT2Q8IXI1 618 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 SRRM1Q8IYB3 904 aaKnown RBP17.02■□□□□ 0.32
RETREG3-210ENST00000590541 RBMXL3Q8N7X1 1067 aaKnown RBP17.02■□□□□ 0.32
RETREG3-210ENST00000590541 C19orf60Q96EN9 201 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 LYSMD1Q96S90 227 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 TDRD1Q9BXT4 1180 aaKnown RBP17.02■□□□□ 0.32
RETREG3-210ENST00000590541 FAM83DQ9H4H8 585 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 ARFGAP3Q9NP61 516 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 SLAMF7Q9NQ25 335 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 SEMA5BQ9P283 1151 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 EPHA6Q9UF33 1036 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 RARRES3Q9UL19 164 aa17.02■□□□□ 0.32
RETREG3-210ENST00000590541 IGHV5-51A0A0C4DH38 117 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 ZNF487B1APH4 448 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 DPM1O60762 260 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 BRAFP15056 766 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 MX2P20592 715 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 LPOP22079 712 aaPredicted RBP17.01■□□□□ 0.31
RETREG3-210ENST00000590541 PPP1CAP62136 330 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 RPS15P62841 145 aaKnown RBP17.01■□□□□ 0.31
RETREG3-210ENST00000590541 DSC2Q02487 901 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 ITKQ08881 620 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 GALNT2Q10471 571 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 TUBB3Q13509 450 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 IFI16Q16666 785 aaKnown RBP17.01■□□□□ 0.31
RETREG3-210ENST00000590541 ANKRD20A8PQ5CZ79 823 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 ALG1LQ6GMV1 187 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 IRGCQ6NXR0 463 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 CYB5D1Q6P9G0 228 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 FDCSPQ8NFU4 85 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 ADAMTS17Q8TE56 1095 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 ZDHHC12Q96GR4 267 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 SLC41A2Q96JW4 573 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 FCRL4Q96PJ5 515 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 TSGA13Q96PP4 275 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 NUDT9Q9BW91 350 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 POLR1EQ9GZS1 481 aaKnown RBP17.01■□□□□ 0.31
RETREG3-210ENST00000590541 RAB33BQ9H082 229 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 OR2AG1Q9H205 316 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 NHEJ1Q9H9Q4 299 aaPredicted RBP17.01■□□□□ 0.31
RETREG3-210ENST00000590541 SLC40A1Q9NP59 571 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 POT1Q9NUX5 634 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 DTLQ9NZJ0 730 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 MAP10Q9P2G4 905 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 INTUQ9ULD6 942 aa17.01■□□□□ 0.31
RETREG3-210ENST00000590541 FARSAQ9Y285 508 aaKnown RBP17.01■□□□□ 0.31
RETREG3-210ENST00000590541 C1orf232A0A0U1RR37 186 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 KRT86O43790 486 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 MTA2O94776 668 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 CBX6O95503 412 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 CCNCP24863 283 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 ELAVL4P26378 380 aaKnown RBP17■□□□□ 0.31
RETREG3-210ENST00000590541 VARSP26640 1264 aaKnown RBP17■□□□□ 0.31
RETREG3-210ENST00000590541 MMRN1Q13201 1228 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 GPR18Q14330 331 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 KCNAB1Q14722 419 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 NR6A1Q15406 480 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 SEPT7Q16181 437 aaKnown RBP17■□□□□ 0.31
RETREG3-210ENST00000590541 PLA2G4EQ3MJ16 856 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 NCBP2-AS2Q69YL0 99 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 SARM1Q6SZW1 724 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17■□□□□ 0.31
RETREG3-210ENST00000590541 RNF214Q8ND24 703 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 SLC35G2Q8TBE7 412 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 PNPLA2Q96AD5 504 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 FAF2Q96CS3 445 aa17■□□□□ 0.31
RETREG3-210ENST00000590541 PACSIN1Q9BY11 444 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms