RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TSSK1BQ9BXA7 367 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 SLC17A9Q9BYT1 436 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 ZCCHC2Q9C0B9 1178 aaKnown RBP21.99■■□□□ 1.11
ATG4D-209ENST00000588857 IGSF5Q9NSI5 407 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 GALPQ9UBC7 116 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 DHRS7Q9Y394 339 aa21.99■■□□□ 1.11
ATG4D-209ENST00000588857 WDR91A4D1P6 747 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 LRRC72A6NJI9 287 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 SHOX2O60902 331 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-209ENST00000588857 AP2A2O94973 939 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 PAK4O96013 591 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-209ENST00000588857 PCCBP05166 539 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 NEFHP12036 1026 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 ITGB6P18564 788 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 CLCN7P51798 805 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 NUBP1P53384 320 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 NKAPQ8N5F7 415 aaKnown RBP21.98■■□□□ 1.11
ATG4D-209ENST00000588857 CD200R1Q8TD46 325 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 INPP5DQ92835 1189 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 KLK6Q92876 244 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 MAGEB18Q96M61 343 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 GPR78Q96P69 363 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 SGK2Q9HBY8 427 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 USP36Q9P275 1121 aaKnown RBP21.98■■□□□ 1.11
ATG4D-209ENST00000588857 CNOT6Q9ULM6 557 aaKnown RBP21.98■■□□□ 1.11
ATG4D-209ENST00000588857 ZNF318Q5VUA4 2279 aa21.98■■□□□ 1.11
ATG4D-209ENST00000588857 QSOX1O00391 747 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 MAGEC1O60732 1142 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 ACSL1P33121 698 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 IL2P60568 153 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 TMEM115Q12893 351 aaPredicted RBP21.97■■□□□ 1.11
ATG4D-209ENST00000588857 ACAP2Q15057 778 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 KHDC1Q4VXA5 237 aaKnown RBP21.97■■□□□ 1.11
ATG4D-209ENST00000588857 ZNF648Q5T619 568 aaPredicted RBP21.97■■□□□ 1.11
ATG4D-209ENST00000588857 LRRC8EQ6NSJ5 796 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 ADAMTSL4Q6UY14 1074 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 FSTL5Q8N475 847 aaPredicted RBP21.97■■□□□ 1.11
ATG4D-209ENST00000588857 PLA2G15Q8NCC3 412 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 OR2T34Q8NGX1 318 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 CLDN23Q96B33 292 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 SGF29Q96ES7 293 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 HIC2Q96JB3 615 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 HHIPQ96QV1 700 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 UNKQ9C0B0 810 aaKnown RBP21.97■■□□□ 1.11
ATG4D-209ENST00000588857 CCDC134Q9H6E4 229 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 CD93Q9NPY3 652 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 SPATS2LQ9NUQ6 558 aaKnown RBP21.97■■□□□ 1.11
ATG4D-209ENST00000588857 C2orf42Q9NWW7 574 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 EBF1Q9UH73 591 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 MID2Q9UJV3 735 aa21.97■■□□□ 1.11
ATG4D-209ENST00000588857 RRP9O43818 475 aaKnown RBP21.96■■□□□ 1.11
ATG4D-209ENST00000588857 FGL2Q14314 439 aa21.96■■□□□ 1.11
ATG4D-209ENST00000588857 PDK4Q16654 411 aa21.96■■□□□ 1.11
ATG4D-209ENST00000588857 OTOAQ7RTW8 1153 aa21.96■■□□□ 1.11
ATG4D-209ENST00000588857 SPEM1Q8N4L4 309 aa21.96■■□□□ 1.11
ATG4D-209ENST00000588857 GIMAP7Q8NHV1 300 aa21.96■■□□□ 1.11
ATG4D-209ENST00000588857 LENG8Q96PV6 779 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-209ENST00000588857 SLC30A3Q99726 388 aa21.96■■□□□ 1.11
ATG4D-209ENST00000588857 MRPL57Q9BQC6 102 aaKnown RBP21.96■■□□□ 1.11
ATG4D-209ENST00000588857 CHRDQ9H2X0 955 aa21.96■■□□□ 1.11
ATG4D-209ENST00000588857 SIT1Q9Y3P8 196 aa21.96■■□□□ 1.11
ATG4D-209ENST00000588857 BIRC5O15392 142 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 IGLV3-19P01714 112 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 RBP1P09455 135 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 CPA3P15088 417 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 MAT2AP31153 395 aaKnown RBP21.95■■□□□ 1.11
ATG4D-209ENST00000588857 RPS9P46781 194 aaKnown RBP21.95■■□□□ 1.11
ATG4D-209ENST00000588857 IRF4Q15306 451 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 TTLL9Q3SXZ7 439 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 HEATR4Q86WZ0 1026 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 NUDCD3Q8IVD9 361 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 SPNS2Q8IVW8 549 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 ZBTB2Q8N680 514 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 RASGEF1AQ8N9B8 481 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 RDH11Q8TC12 318 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 LKAAEAR1Q8TD35 194 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 LRRC8CQ8TDW0 803 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 ASB12Q8WXK4 309 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 MRPL46Q9H2W6 279 aaKnown RBP21.95■■□□□ 1.11
ATG4D-209ENST00000588857 TRIM39Q9HCM9 518 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 PSD3Q9NYI0 1048 aa21.95■■□□□ 1.11
ATG4D-209ENST00000588857 CPSF2Q9P2I0 782 aaKnown RBP21.95■■□□□ 1.11
ATG4D-209ENST00000588857 FTH1P02794 183 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 BPGMP07738 259 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 CD1DP15813 335 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 TEAD1P28347 426 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 OXTRP30559 389 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 ATP6V0D1P61421 351 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 PPP2CBP62714 309 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 PPP2CAP67775 309 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 GTF2H3Q13889 308 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 TRIM74Q86UV6 250 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 TRIM69Q86WT6 500 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 TRIM42Q8IWZ5 723 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 CPNE9Q8IYJ1 553 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 TP53I13Q8NBR0 393 aaPredicted RBP21.95■■□□□ 1.1
ATG4D-209ENST00000588857 PRSS33Q8NF86 280 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 LINGO1Q96FE5 620 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 DERL2Q9GZP9 239 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 MBNL1Q9NR56 388 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms