RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	SLCO4A1	Q96BD0	722 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	MPP4	Q96JB8	637 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	MYRFL	Q96LU7	910 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PHOX2B	Q99453	314 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ZBTB18	Q99592	522 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	SPON2	Q9BUD6	331 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TDRD1	Q9BXT4	1180 aa	Known RBP	13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CWH43	Q9H720	699 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	LMCD1	Q9NZU5	365 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	MAP10	Q9P2G4	905 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ATXN10	Q9UBB4	475 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ANAPC2	Q9UJX6	822 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PKP3	Q9Y446	797 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CHD5	Q8TDI0	1954 aa		13.9	□□□□□ -0.18
NEDD4L-223	ENST00000588516	RNF103-CHMP3	A0A140T963	221 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ATP6AP2	A0A1C7CYW4	349 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	EME2	A4GXA9	379 aa	Predicted RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ZNF839	A8K0R7	811 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	BTN3A1	O00481	513 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	NME4	O00746	187 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TULP3	O75386	442 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ATP6AP2	O75787	350 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ENO2	P09104	434 aa	Predicted RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CHRM1	P11229	460 aa	Predicted RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CR2	P20023	1033 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MYF6	P23409	242 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SLC6A2	P23975	617 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	HOXD9	P28356	352 aa	Predicted RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MAPK8	P45983	427 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RGS4	P49798	205 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SCNN1B	P51168	640 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	POLR2J	P52435	117 aa	Known RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ARPP19	P56211	112 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CDKL1	Q00532	357 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CACNG1	Q06432	222 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PRKG2	Q13237	762 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	BFSP2	Q13515	415 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RCAN2	Q14206	197 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	VPS26B	Q4G0F5	336 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ATP6AP1L	Q52LC2	224 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	INO80D	Q53TQ3	878 aa	Predicted RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	XKR7	Q5GH72	579 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	NADSYN1	Q6IA69	706 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CYP2R1	Q6VVX0	501 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CYHR1	Q6ZMK1	362 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RNF165	Q6ZSG1	346 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	DPP10	Q8N608	796 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TFAP2C	Q92754	450 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	FUBP1	Q96AE4	644 aa	Known RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	VWCE	Q96DN2	955 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	C3orf30	Q96M34	536 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	GPR21	Q99679	349 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SH3GL1	Q99961	368 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TTPAL	Q9BTX7	342 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	BDH2	Q9BUT1	245 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	GRIP2	Q9C0E4	1043 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TNFRSF12A	Q9NP84	129 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	AGPAT4	Q9NRZ5	378 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TRMT13	Q9NUP7	481 aa	Known RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CD274	Q9NZQ7	290 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RSL24D1	Q9UHA3	163 aa	Known RBP	13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MAGEL2	Q9UJ55	1249 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PCTP	Q9UKL6	214 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PCDHA9	Q9Y5H5	950 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SLC30A1	Q9Y6M5	507 aa		13.9	□□□□□ -0.19
NEDD4L-223	ENST00000588516	GREB1	Q4ZG55	1949 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TTC24	A2A3L6	582 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ANKRD66	B4E2M5	251 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ARNTL	O00327	626 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	VILL	O15195	856 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RAD51B	O15315	384 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TBC1D4	O60343	1298 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TBX18	O95935	607 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	LINC00032	P0C843	101 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ATP6V1B1	P15313	513 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CD1E	P15812	388 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ALDH3B2	P48448	385 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CDK9	P50750	372 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ATXN3	P54252	364 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PTPN5	P54829	565 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	NUP107	P57740	925 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	EMX2	Q04743	252 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	EPS8	Q12929	822 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	9e-7	■■■■■ 36.7
NEDD4L-223	ENST00000588516	NRF1	Q16656	503 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	FUT10	Q6P4F1	479 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TTC33	Q6PID6	262 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	FRA10AC1	Q70Z53	315 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SPRED2	Q7Z698	418 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SPRED1	Q7Z699	444 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ERI1	Q8IV48	349 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CANT1	Q8WVQ1	401 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SEPT8	Q92599	483 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TMEM125	Q96AQ2	219 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	NMD3	Q96D46	503 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PPP3R2	Q96LZ3	170 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SEMA6A	Q9H2E6	1030 aa		13.89	□□□□□ -0.19

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