RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ZRANB3Q5FWF4 1079 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 AMZ2Q86W34 360 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 NXPE1Q8N323 547 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 ACTRT1Q8TDG2 376 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 ATXN7L3BQ96GX2 97 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 CDKN2AIPNLQ96HQ2 116 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 ZNF514Q96K75 400 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-217ENST00000588230 CASS4Q9NQ75 786 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 EIF2B3Q9NR50 452 aaKnown RBP18.9■□□□□ 0.62
CIRBP-217ENST00000588230 SMARCAL1Q9NZC9 954 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 ATXN7L1Q9ULK2 861 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-217ENST00000588230 LHX6Q9UPM6 363 aa18.9■□□□□ 0.62
CIRBP-217ENST00000588230 ZNF106Q9H2Y7 1883 aaKnown RBP18.9■□□□□ 0.62
CIRBP-217ENST00000588230 HEATR9A2RTY3 570 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 PMS2P1A4D2B8 440 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 A6NCN8 305 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 AGAP14A8MT82 685 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 CFAP99D6REC4 459 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 H7C0S8 307 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 ADRA1DP25100 572 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 EIF2S3P41091 472 aaKnown RBP18.89■□□□□ 0.61
CIRBP-217ENST00000588230 PPM1FP49593 454 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-217ENST00000588230 HHEXQ03014 270 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 CCDC173Q0VFZ6 552 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 NR1D2Q14995 579 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 TRIP13Q15645 432 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-217ENST00000588230 TBC1D25Q3MII6 688 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 FNBP1LQ5T0N5 605 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 DET1Q7L5Y6 550 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 TAS2R42Q7RTR8 314 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 C11orf96Q7Z7L8 435 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 SLC9B2Q86UD5 537 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 AVL9Q8NBF6 648 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 HEXDCQ8WVB3 486 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 HNRNPLLQ8WVV9 542 aaKnown RBP18.89■□□□□ 0.61
CIRBP-217ENST00000588230 SH3KBP1Q96B97 665 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 SGF29Q96ES7 293 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 PRR11Q96HE9 360 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-217ENST00000588230 TMEM74Q96NL1 305 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 SLC38A3Q99624 504 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 COPS8Q99627 209 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 SARS2Q9NP81 518 aaKnown RBP18.89■□□□□ 0.61
CIRBP-217ENST00000588230 KCNK4Q9NYG8 393 aa18.89■□□□□ 0.61
CIRBP-217ENST00000588230 DNMT3AQ9Y6K1 912 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-217ENST00000588230 GOLGA6L10A0A0M3HER8 536 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 CES2O00748 559 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 CPNE6O95741 557 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 KRT14P02533 472 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 TCP1P17987 556 aaKnown RBP18.88■□□□□ 0.61
CIRBP-217ENST00000588230 COILP38432 576 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-217ENST00000588230 LSSP48449 732 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 VPS41P49754 854 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 INHBCP55103 352 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 GABREP78334 506 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 CACNG1Q06432 222 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 SEPT7Q16181 437 aaKnown RBP18.88■□□□□ 0.61
CIRBP-217ENST00000588230 CYP1B1Q16678 543 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 MAP9Q49MG5 647 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 TTC27Q6P3X3 843 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 USP53Q70EK8 1073 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 B3GNT8Q7Z7M8 397 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 PIM3Q86V86 326 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 RANBP9Q96S59 729 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 FOXP3Q9BZS1 431 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 STRADBQ9C0K7 418 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 POLR1BQ9H9Y6 1135 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 EPB41L5Q9HCM4 733 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 ASCL3Q9NQ33 180 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 CPNE7Q9UBL6 633 aa18.88■□□□□ 0.61
CIRBP-217ENST00000588230 PRR19A6NJB7 356 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 AP3B1O00203 1094 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 ZNF185O15231 689 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 PSMA3P25788 255 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 RPL10P27635 214 aaKnown RBP18.87■□□□□ 0.61
CIRBP-217ENST00000588230 SESN2P58004 480 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-217ENST00000588230 GPS1Q13098 491 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 CLPPQ16740 277 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-217ENST00000588230 C3orf38Q5JPI3 329 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-217ENST00000588230 CCDC137Q6PK04 289 aaKnown RBP18.87■□□□□ 0.61
CIRBP-217ENST00000588230 IGF2-ASQ6U949 168 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 ABRAXAS1Q6UWZ7 409 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 NLRP9Q7RTR0 991 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 SERPINA9Q86WD7 417 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 ZNF761Q86XN6 746 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-217ENST00000588230 TRIM48Q8IWZ4 208 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 LSMEM2Q8N112 164 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 PPHLN1Q8NEY8 458 aaKnown RBP18.87■□□□□ 0.61
CIRBP-217ENST00000588230 FGF11Q92914 225 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 CRELD1Q96HD1 420 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 AHCYL2Q96HN2 611 aaKnown RBP18.87■□□□□ 0.61
CIRBP-217ENST00000588230 RDH14Q9HBH5 336 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 ZDHHC3Q9NYG2 299 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 SATB2Q9UPW6 733 aa18.87■□□□□ 0.61
CIRBP-217ENST00000588230 IGHV1OR21-1A0A087WYE8 117 aa18.86■□□□□ 0.61
CIRBP-217ENST00000588230 CCDC187A0A096LP49 1063 aa18.86■□□□□ 0.61
CIRBP-217ENST00000588230 TRBV5-4A0A0C4DH59 114 aa18.86■□□□□ 0.61
CIRBP-217ENST00000588230 PHF2O75151 1096 aa18.86■□□□□ 0.61
CIRBP-217ENST00000588230 VIPP01282 170 aa18.86■□□□□ 0.61
CIRBP-217ENST00000588230 XRCC1P18887 633 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms