RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 GPR89AB7ZAQ6 455 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 H3BM21 787 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 NDUFS3O75489 264 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 PIAS2O75928 621 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 HAUS5O94927 633 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 ACSL3O95573 720 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 GPR89BP0CG08 455 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 RALBP11234 206 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 CTSEP14091 401 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF7P17097 686 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 DGKAP23743 735 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 AK4P27144 223 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 EPHA8P29322 1005 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 FMO4P31512 558 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 NSG1P42857 185 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 ABCG1P45844 678 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 BLKP51451 505 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 ATXN3P54252 364 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 PMS2P54278 862 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 HNRNPKP61978 463 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 CTBSQ01459 385 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 MGAT5Q09328 741 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 SLMAPQ14BN4 828 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 AASDHQ4L235 1098 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 CTSL3PQ5NE16 218 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 CNSTQ6PJW8 725 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 CYS1Q717R9 158 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 CHST15Q7LFX5 561 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 LRRTM4Q86VH4 590 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 NRROSQ86YC3 692 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 OXR1Q8N573 874 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF548Q8NEK5 533 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 CALML6Q8TD86 181 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 LMX1AQ8TE12 382 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 SAP25Q8TEE9 199 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 HEXDCQ8WVB3 486 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 LPGAT1Q92604 370 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 BIRC8Q96P09 236 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 OR2M4Q96R27 311 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 TCF12Q99081 682 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 TTC1Q99614 292 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 FAM167BQ9BTA0 163 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 SLC13A1Q9BZW2 595 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 ZCCHC2Q9C0B9 1178 aaKnown RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 P2RY12Q9H244 342 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 DNAAF2Q9NVR5 837 aaKnown RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 SPASTQ9UBP0 616 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 GULP1Q9UBP9 304 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 RAB21Q9UL25 225 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 GPR34Q9UPC5 381 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 PSAT1Q9Y617 370 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 FAM159BA6NKW6 160 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 C4orf47A7E2U8 309 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 CFAP99D6REC4 459 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 PRMT5O14744 637 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 KMOO15229 486 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 AQP9O43315 295 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 DFNA5O60443 496 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 POP7O75817 140 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 AHSGP02765 367 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 GIMD1P0DJR0 217 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 ACP5P13686 325 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 ITGB6P18564 788 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 RPS3P23396 243 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 PBLDP30039 288 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 PPARGP37231 505 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 LEPRP48357 1165 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 ARRB1P49407 418 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 PRLHRP49683 370 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 CCT8P50990 548 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 EIF3BP55884 814 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 EFTUD2Q15029 972 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 KBTBD12Q3ZCT8 623 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 BCL7AQ4VC05 210 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF549Q6P9A3 640 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 XKR5Q6UX68 686 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 NAPRTQ6XQN6 538 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 LMNTD2Q8IXW0 634 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 KRT222Q8N1A0 295 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 LILRA3Q8N6C8 439 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 UHMK1Q8TAS1 419 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 LKAAEAR1Q8TD35 194 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 GPBAR1Q8TDU6 330 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 AENQ8WTP8 325 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 EPB41L4BQ9H329 900 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 KLC4Q9NSK0 619 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 INTS10Q9NVR2 710 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 TRNAU1APQ9NX07 287 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 GALPQ9UBC7 116 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 KCNK6Q9Y257 313 aa10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 ZFC3H1O60293 1989 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-213ENST00000587988 CABIN1Q9Y6J0 2220 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 YY2O15391 372 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 RIPK2O43353 540 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 PCDHGA12O60330 932 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 SPAG6O75602 509 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 FAM155BO75949 473 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms