RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 TLK1Q9UKI8 766 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 CAPN11Q9UMQ6 739 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 ZNF711Q9Y462 761 aa13.81□□□□□ -0.2
DNMT1-213ENST00000587604 CDC14CA4D256 554 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 C21orf140B9A014 251 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 KCNJ13O60928 360 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 SPTBP11277 2137 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 VCLP18206 1134 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 PMS2P54278 862 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 DRG2P55039 364 aaKnown RBP13.8□□□□□ -0.2
DNMT1-213ENST00000587604 MLLT10P55197 1068 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 AP1B1Q10567 949 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 DNASE1L3Q13609 305 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 SLC14A2Q15849 920 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 KHDC1Q4VXA5 237 aaKnown RBP13.8□□□□□ -0.2
DNMT1-213ENST00000587604 IRGCQ6NXR0 463 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 C11orf96Q7Z7L8 435 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 TMEM135Q86UB9 458 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 BPHLQ86WA6 291 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-213ENST00000587604 PLD5Q8N7P1 536 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 TADA1Q96BN2 335 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 AGAP3Q96P47 875 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 FCRL4Q96PJ5 515 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 VPS35Q96QK1 796 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 SLC25A51Q9H1U9 297 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 PDE7BQ9NP56 450 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 SEMA5BQ9P283 1151 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 TMPRSS11EQ9UL52 423 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 NENFQ9UMX5 172 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 HEY1Q9Y5J3 304 aa13.8□□□□□ -0.2
DNMT1-213ENST00000587604 TNRC6AQ8NDV7 1962 aaKnown RBP13.8□□□□□ -0.2
DNMT1-213ENST00000587604 SLC4A1P02730 911 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 H2AFZP0C0S5 128 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 CASP14P31944 242 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 TMEM115Q12893 351 aaPredicted RBP13.79□□□□□ -0.2
DNMT1-213ENST00000587604 SEMA5AQ13591 1074 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 PDK1Q15118 436 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 PCSK7Q16549 785 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 SLC9A4Q6AI14 798 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 CCDC70Q6NSX1 233 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 H2AFVQ71UI9 128 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 VSIG1Q86XK7 387 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 BRSK1Q8TDC3 778 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 CT55Q8WUE5 264 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 SEC14L1Q92503 715 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 UBXN4Q92575 508 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 SLC41A2Q96JW4 573 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 GPR87Q9BY21 358 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 CEP41Q9BYV8 373 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 BRD8Q9H0E9 1235 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 CBX8Q9HC52 389 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 RARRES3Q9UL19 164 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 WDR37Q9Y2I8 494 aa13.79□□□□□ -0.2
DNMT1-213ENST00000587604 LUC7L2Q9Y383 392 aaKnown RBP13.79□□□□□ -0.2
DNMT1-213ENST00000587604 IGHV5-51A0A0C4DH38 117 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 LRRD1A4D1F6 860 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 BLACEA4D250 179 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 AURKAO14965 403 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 TIAF1O95411 115 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 NDST3O95803 873 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 FECHP22830 423 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 HMGCLP35914 325 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 ANP32AP39687 249 aaKnown RBP13.78□□□□□ -0.2
DNMT1-213ENST00000587604 HALP42357 657 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 UBASH3AP57075 661 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 FANCCQ00597 558 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 GTF2H3Q13889 308 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 ATP13A5Q4VNC0 1218 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 FAM182AQ5T1J6 154 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 PWWP2BQ6NUJ5 590 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 KLHL35Q6PF15 583 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 TRAPPC5Q8IUR0 188 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 LURAP1LQ8IV03 231 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 SIDT2Q8NBJ9 832 aaKnown RBP13.78□□□□□ -0.2
DNMT1-213ENST00000587604 SPATA22Q8NHS9 363 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 DTX3LQ8TDB6 740 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-213ENST00000587604 THAP4Q8WY91 577 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 CTNNBL1Q8WYA6 563 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-213ENST00000587604 TTC25Q96NG3 672 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 MAK16Q9BXY0 300 aaKnown RBP13.78□□□□□ -0.2
DNMT1-213ENST00000587604 ACTL8Q9H568 366 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 LRRC4CQ9HCJ2 640 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 BPIFA1Q9NP55 256 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 SPO11Q9Y5K1 396 aa13.78□□□□□ -0.2
DNMT1-213ENST00000587604 C3orf70A6NLC5 250 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-213ENST00000587604 APOL1O14791 398 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 PPP1R12AO14974 1030 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-213ENST00000587604 MT-CYBP00156 380 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-213ENST00000587604 PDGFAP04085 211 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 FOLR1P15328 257 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 ZFXP17010 805 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-213ENST00000587604 PPP1CAP62136 330 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 ACY1Q03154 408 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 DMPKQ09013 629 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 TUBB3Q13509 450 aa13.77□□□□□ -0.21
DNMT1-213ENST00000587604 UGT8Q16880 541 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms