RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 MTDHQ86UE4 582 aaKnown RBP20.2■□□□□ 0.82
ATG4D-204ENST00000586417 WDR75Q8IWA0 830 aaKnown RBP20.2■□□□□ 0.82
ATG4D-204ENST00000586417 CLDN19Q8N6F1 224 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 PIP4K2CQ8TBX8 421 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 LKAAEAR1Q8TD35 194 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 NAT14Q8WUY8 206 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 CYP4F12Q9HCS2 524 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 NFKBIL1Q9UBC1 381 aaPredicted RBP20.2■□□□□ 0.82
ATG4D-204ENST00000586417 CD84Q9UIB8 345 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 GNPTGQ9UJJ9 305 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 DHRS7Q9Y394 339 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 IGLV3-16A0A075B6K0 115 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 E5RI56 91 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 F8W8V4 182 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 PLK4O00444 970 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 DCXO43602 365 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 MTHFD2P13995 350 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 ITGB7P26010 798 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 SERPINB3P29508 390 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 DCDC1P59894 354 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 BNIP1Q12981 228 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 PTRHD1Q6GMV3 140 aaKnown RBP20.19■□□□□ 0.82
ATG4D-204ENST00000586417 SYNPOQ8N3V7 929 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 ARRDC3Q96B67 414 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 CDH19Q9H159 772 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 RSPH9Q9H1X1 276 aaPredicted RBP20.19■□□□□ 0.82
ATG4D-204ENST00000586417 ZDHHC3Q9NYG2 299 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 RAP2CQ9Y3L5 183 aa20.19■□□□□ 0.82
ATG4D-204ENST00000586417 KERAO60938 352 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 DCNP07585 359 aaKnown RBP20.18■□□□□ 0.82
ATG4D-204ENST00000586417 XPAP23025 273 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-204ENST00000586417 MPSTP25325 297 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 SCTRP47872 440 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 PSMD8P48556 350 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 B4GALNT1Q00973 533 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 SATB1Q01826 763 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 STARD3Q14849 445 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 EOGTQ5NDL2 527 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 UGT3A1Q6NUS8 523 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 MACC1Q6ZN28 852 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 Q6ZVL8 140 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 SLC22A9Q8IVM8 553 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 CPNE9Q8IYJ1 553 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 CCNYL1Q8N7R7 359 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 EEF1AKMT1Q8WVE0 214 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 EBF4Q9BQW3 602 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 WWP1Q9H0M0 922 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 NCKIPSDQ9NZQ3 722 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 ITM2BQ9Y287 266 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 CDC7O00311 574 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 SERPINB5P36952 375 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 ETV3P41162 512 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 TSNQ15631 228 aaKnown RBP20.18■□□□□ 0.82
ATG4D-204ENST00000586417 CRY1Q16526 586 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 LIPIQ6XZB0 460 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 TECPR1Q7Z6L1 1165 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 OR2T3Q8NH03 318 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 DTX3LQ8TDB6 740 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 SCAMP4Q969E2 229 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 CLDN23Q96B33 292 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 ULK4Q96C45 1275 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 PHF21BQ96EK2 531 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 LINGO1Q96FE5 620 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 ILKAPQ9H0C8 392 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-204ENST00000586417 ACTR5Q9H9F9 607 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-204ENST00000586417 SARS2Q9NP81 518 aaKnown RBP20.18■□□□□ 0.82
ATG4D-204ENST00000586417 SMOXQ9NWM0 555 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 SIT1Q9Y3P8 196 aa20.18■□□□□ 0.82
ATG4D-204ENST00000586417 CHURC1-FNTBB4DL54 471 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 PI15O43692 258 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 GM2AP17900 193 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 IL2P60568 153 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 TUBB3Q13509 450 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 SPDYAQ5MJ70 313 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 ERAP2Q6P179 960 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 CLNKQ7Z7G1 428 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 ALYREFQ86V81 257 aaKnown RBP20.17■□□□□ 0.82
ATG4D-204ENST00000586417 STAG3L4Q8TBR4 150 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 L3HYPDHQ96EM0 354 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 PDLIM5Q96HC4 596 aaKnown RBP20.17■□□□□ 0.82
ATG4D-204ENST00000586417 CNDP1Q96KN2 507 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 COPS8Q99627 209 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 FAM83DQ9H4H8 585 aa20.17■□□□□ 0.82
ATG4D-204ENST00000586417 STN1Q9H668 368 aaKnown RBP20.17■□□□□ 0.82
ATG4D-204ENST00000586417 RGSL1A5PLK6 1076 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 NPEPPSL1A6NEC2 478 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 UBXN8O00124 270 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 MID1O15344 667 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 SMIM24O75264 130 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 TPBGLP0DKB5 382 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 IMPDH1P20839 514 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 NSG1P42857 185 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 RPS14P62263 151 aaKnown RBP20.16■□□□□ 0.82
ATG4D-204ENST00000586417 ACTN3Q08043 901 aaPredicted RBP20.16■□□□□ 0.82
ATG4D-204ENST00000586417 PRKAA1Q13131 559 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 CST6Q15828 149 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 HENMT1Q5T8I9 393 aaKnown RBP20.16■□□□□ 0.82
ATG4D-204ENST00000586417 CWF19L1Q69YN2 538 aaKnown RBP20.16■□□□□ 0.82
ATG4D-204ENST00000586417 DSG4Q86SJ6 1040 aa20.16■□□□□ 0.82
ATG4D-204ENST00000586417 TMPRSS6Q8IU80 811 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms