RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 KPNA5O15131 536 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 TRIM24O15164 1050 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 ITM2AO43736 263 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 MAGEC1O60732 1142 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 KERAO60938 352 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 FSBPO95073 299 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 APODP05090 189 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
LIG3-203ENST00000585370 GJA4P35212 333 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 NSG1P42857 185 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 TNFRSF4P43489 277 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 CXCL12P48061 93 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 RGS4P49798 205 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 CDKN1CP49918 316 aaPredicted RBP10.28□□□□□ -0.76
LIG3-203ENST00000585370 RPL14P50914 215 aaKnown RBP10.28□□□□□ -0.76
LIG3-203ENST00000585370 NAGLUP54802 743 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 ACTN3Q08043 901 aaPredicted RBP10.28□□□□□ -0.76
LIG3-203ENST00000585370 DMWDQ09019 674 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 ELP6Q0PNE2 266 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 ELAVL3Q14576 367 aaKnown RBP10.28□□□□□ -0.76
LIG3-203ENST00000585370 CHRNA6Q15825 494 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 LPAL2Q16609 132 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 CES4AQ5XG92 561 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 PAQR3Q6TCH7 311 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 TMEM207Q6UWW9 146 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 FAM151BQ6UXP7 276 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 PHTF2Q8N3S3 785 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 SPEM1Q8N4L4 309 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 ANKRD49Q8WVL7 239 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 SORCS1Q8WY21 1168 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 L3HYPDHQ96EM0 354 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 RMDN2Q96LZ7 410 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 PANX3Q96QZ0 392 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 SORT1Q99523 831 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 GPR21Q99679 349 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 C20orf27Q9GZN8 174 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 TMEM245Q9H330 911 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 FAM83DQ9H4H8 585 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 C8orf33Q9H7E9 229 aaPredicted RBP10.28□□□□□ -0.76
LIG3-203ENST00000585370 ABCF3Q9NUQ8 709 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 MRGBPQ9NV56 204 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 SMOXQ9NWM0 555 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 KCTD5Q9NXV2 234 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 THAP10Q9P2Z0 257 aaPredicted RBP10.28□□□□□ -0.76
LIG3-203ENST00000585370 HEY2Q9UBP5 337 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 ZFP69BQ9UJL9 534 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 CFAP73A6NFT4 308 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 C16orf96A6NNT2 1141 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 CFAP99D6REC4 459 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 C1QTNF3-AMACRE9PGA6 284 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 K7ESF4 209 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 HDAC3O15379 428 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 HRO43593 1189 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 OR1I1O60431 355 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 DNAJC8O75937 253 aaPredicted RBP10.27□□□□□ -0.77
LIG3-203ENST00000585370 UBOX5O94941 541 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 AP2A2O94973 939 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 PRSS56P0CW18 603 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 CBSLP0DN79 551 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 HNRNPLP14866 589 aaKnown RBP eCLIP10.27□□□□□ -0.77
LIG3-203ENST00000585370 DGKAP23743 735 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 ITGB7P26010 798 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 CTHP32929 405 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 CBSP35520 551 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 GMPRP36959 345 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 OPRD1P41143 372 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 SCTRP47872 440 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 AQP5P55064 265 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 SF3A3Q12874 501 aaKnown RBP eCLIP10.27□□□□□ -0.77
LIG3-203ENST00000585370 KRT72Q14CN4 511 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 PTPRRQ15256 657 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 TTLL9Q3SXZ7 439 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 CTSL3PQ5NE16 218 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 C9orf64Q5T6V5 341 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 FAM46CQ5VWP2 391 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 SERPINA13PQ6UXR4 307 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 Q6ZS52 159 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 MTDHQ86UE4 582 aaKnown RBP10.27□□□□□ -0.77
LIG3-203ENST00000585370 TSPAN33Q86UF1 283 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 NLRP8Q86W28 1048 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 RALGPS2Q86X27 583 aaPredicted RBP10.27□□□□□ -0.77
LIG3-203ENST00000585370 TRAM1L1Q8N609 369 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 CCNYL1Q8N7R7 359 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 TXNDC5Q8NBS9 432 aaKnown RBP10.27□□□□□ -0.77
LIG3-203ENST00000585370 GPR26Q8NDV2 337 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 RAB7BQ96AH8 199 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 THOC1Q96FV9 657 aaKnown RBP10.27□□□□□ -0.77
LIG3-203ENST00000585370 MSANTD3Q96H12 275 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 COPS8Q99627 209 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 ZSCAN5AQ9BUG6 496 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 ALG9Q9H6U8 611 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 PCDH12Q9NPG4 1184 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 DYRK4Q9NR20 520 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 SPATS2LQ9NUQ6 558 aaKnown RBP10.27□□□□□ -0.77
LIG3-203ENST00000585370 PPM1HQ9ULR3 514 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 SLC12A4Q9UP95 1085 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 FNDC3AQ9Y2H6 1198 aaKnown RBP10.27□□□□□ -0.77
LIG3-203ENST00000585370 MED16Q9Y2X0 877 aa10.27□□□□□ -0.77
LIG3-203ENST00000585370 CNOT1A5YKK6 2376 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms