RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CNTFP26441 200 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 MAGEA6P43360 314 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 BIRC2Q13490 618 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 CAMK1Q14012 370 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 CYLC2Q14093 348 aaPredicted RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 CCSMST1Q4G0I0 132 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 TMEM259Q4ZIN3 620 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 ADNP2Q6IQ32 1131 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 CFAP206Q8IYR0 622 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 STYXQ8WUJ0 223 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 SNX19Q92543 992 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 AURKBQ96GD4 344 aaPredicted RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 TOX2Q96NM4 488 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 EBF2Q9HAK2 575 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 SLAMF8Q9P0V8 285 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 OR1A2Q9Y585 309 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 COPG1Q9Y678 874 aaKnown RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 TPRP12270 2363 aaKnown RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 RNASEH2AO75792 299 aaKnown RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 CDK14O94921 469 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 CALB2P22676 271 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 CLCN5P51795 746 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 RPL38P63173 70 aaKnown RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 SULT2A1Q06520 285 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 RING1Q06587 406 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 DHCR24Q15392 516 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 MYLK3Q32MK0 819 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 TMTC4Q5T4D3 741 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 CAPRIN2Q6IMN6 1127 aaKnown RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 CRTC1Q6UUV9 634 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 HSD11B1LQ7Z5J1 315 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 LSMEM2Q8N112 164 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 FAM110BQ8TC76 370 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 PCDH12Q9NPG4 1184 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 TM7SF3Q9NS93 570 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 LMCD1Q9NZU5 365 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 DEC1Q9P2X7 70 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 DOCK9Q9BZ29 2069 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 EPOPA6NHQ4 379 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 DNAJC8O75937 253 aaPredicted RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 PRKAA1Q13131 559 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 PGS1Q32NB8 556 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 HMGN2P46Q86SG4 172 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 MAGED4Q96JG8 741 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 COPS8Q99627 209 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 AKTIPQ9H8T0 292 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 CAPN10Q9HC96 672 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 KLHL20Q9Y2M5 609 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 POLR3HQ9Y535 204 aaPredicted RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 MICAL3Q7RTP6 2002 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 NOTCH4Q99466 2003 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 HEPACAM2A8MVW5 462 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 NVLO15381 856 aaKnown RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 SLC7A4O43246 635 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 ZDHHC11BP0C7U3 371 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 XRCC1P18887 633 aaPredicted RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 PTDSS1P48651 473 aaKnown RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 CLCQ05315 142 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 PTGR1Q14914 329 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 FAM78AQ5JUQ0 283 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 ANKS6Q68DC2 871 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 AFTPHQ6ULP2 937 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 TWIST2Q8WVJ9 160 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 SH3KBP1Q96B97 665 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 AP2M1Q96CW1 435 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 MGME1Q9BQP7 344 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 YY1AP1Q9H869 796 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 IPPKQ9H8X2 491 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 PPCSQ9HAB8 311 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 ZNF212Q9UDV6 495 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 RAP2CQ9Y3L5 183 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 GRID2O43424 1007 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 SH3BP5O60239 455 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 TBX10O75333 385 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 COL6A1P12109 1028 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 PDHA2P29803 388 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 BDKRB1P46663 353 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 SETMARQ53H47 684 aaPredicted RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 SWT1Q5T5J6 900 aaKnown RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 DUS1LQ6P1R4 473 aaKnown RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 CHST15Q7LFX5 561 aaPredicted RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 C11orf74Q86VG3 221 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 MYO1HQ8N1T3 1032 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 SKA1Q96BD8 255 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 MIEF2Q96C03 454 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 AARSD1Q9BTE6 412 aaKnown RBP10.16□□□□□ -0.78
RFFL-212ENST00000584655 SLC8A2Q9UPR5 921 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 SLC22A14Q9Y267 594 aa10.16□□□□□ -0.78
RFFL-212ENST00000584655 PGLSO95336 258 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 MTHFD1P11586 935 aaKnown RBP10.15□□□□□ -0.78
RFFL-212ENST00000584655 ZNF7P17097 686 aaPredicted RBP10.15□□□□□ -0.78
RFFL-212ENST00000584655 AQP1P29972 269 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 THOP1P52888 689 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 FLOT2Q14254 428 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 MFSD1Q9H3U5 465 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 ABCA7Q8IZY2 2146 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 IGLV3-10A0A075B6K4 115 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 LOC285095A0A1B0GVY8 99 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 PSMD12O00232 456 aaPredicted RBP10.15□□□□□ -0.78
RFFL-212ENST00000584655 SEC22BO75396 215 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms