RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 RALGPS1Q5JS13 557 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 ATP1A1-AS1Q5TC04 95 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 C8orf74Q6P047 294 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 CCDC137Q6PK04 289 aaKnown RBP20.24■□□□□ 0.83
SRSF1-206ENST00000583741 WDR74Q6RFH5 385 aaPredicted RBP20.24■□□□□ 0.83
SRSF1-206ENST00000583741 CLEC18BQ6UXF7 455 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 BBS5Q8N3I7 341 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 CLEC18CQ8NCF0 446 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 UBXN4Q92575 508 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 KIAA1143Q96AT1 154 aaPredicted RBP20.24■□□□□ 0.83
SRSF1-206ENST00000583741 RUNDC3BQ96NL0 473 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 MFSD11O43934 449 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 SERPINB6P35237 376 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
SRSF1-206ENST00000583741 NR2C2P49116 596 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 GBE1Q04446 702 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 NFATC2Q13469 925 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 MARC1Q5VT66 337 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 CCDC70Q6NSX1 233 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 TTC27Q6P3X3 843 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 DRICH1Q6PGQ1 229 aaPredicted RBP20.24■□□□□ 0.83
SRSF1-206ENST00000583741 CEACAM20Q6UY09 585 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 ZNF765Q7L2R6 523 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 SLC35B2Q8TB61 432 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 ABHD17AQ96GS6 310 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 RIOK2Q9BVS4 552 aaKnown RBP20.24■□□□□ 0.83
SRSF1-206ENST00000583741 SARS2Q9NP81 518 aaKnown RBP20.24■□□□□ 0.83
SRSF1-206ENST00000583741 NT5MQ9NPB1 228 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 TBC1D29Q9UFV1 150 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 DNPEPQ9ULA0 475 aa20.24■□□□□ 0.83
SRSF1-206ENST00000583741 OAS3Q9Y6K5 1087 aaKnown RBP20.24■□□□□ 0.83
SRSF1-206ENST00000583741 SPTBN1Q01082 2364 aaKnown RBP20.23■□□□□ 0.83
SRSF1-206ENST00000583741 ZNF106Q9H2Y7 1883 aaKnown RBP20.23■□□□□ 0.83
SRSF1-206ENST00000583741 DNAJC6O75061 913 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 STK17BO94768 372 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 EIF3EP60228 445 aaKnown RBP20.23■□□□□ 0.83
SRSF1-206ENST00000583741 DEFB109BQ30KR1 87 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 BZW1Q7L1Q6 419 aaKnown RBP20.23■□□□□ 0.83
SRSF1-206ENST00000583741 STARD8Q92502 1023 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 NCSTNQ92542 709 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 FBXO8Q9NRD0 319 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 DTLQ9NZJ0 730 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.23■□□□□ 0.83
SRSF1-206ENST00000583741 PCYOX1Q9UHG3 505 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 AMACRQ9UHK6 382 aa20.23■□□□□ 0.83
SRSF1-206ENST00000583741 TMEM184BQ9Y519 407 aaPredicted RBP20.23■□□□□ 0.83
SRSF1-206ENST00000583741 V9GYY5 206 aaPredicted RBP20.23■□□□□ 0.83
SRSF1-206ENST00000583741 A0A0J9YYE9 177 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 TRBC1P01850 177 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 KCNJ1P48048 391 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 STC1P52823 247 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 DR1Q01658 176 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 ABHD18Q0P651 414 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 DHX34Q14147 1143 aaKnown RBP20.22■□□□□ 0.83
SRSF1-206ENST00000583741 CHST15Q7LFX5 561 aaPredicted RBP20.22■□□□□ 0.83
SRSF1-206ENST00000583741 MAATS1Q7Z4T9 603 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 NLRP8Q86W28 1048 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 TEX26Q8N6G2 289 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 GRK7Q8WTQ7 553 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 NSMCE1Q8WV22 266 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 LRRC1Q9BTT6 524 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 KLHL3Q9UH77 587 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 ZNHIT2Q9UHR6 403 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 KCNK6Q9Y257 313 aa20.22■□□□□ 0.83
SRSF1-206ENST00000583741 MRPS18BQ9Y676 258 aaKnown RBP20.22■□□□□ 0.83
SRSF1-206ENST00000583741 A6NCN8 305 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 ASMTLO95671 621 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 DLGAP3O95886 979 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 RBP3P10745 1247 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 GP1BBP13224 206 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 ZNF30P17039 623 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 MAPK9P45984 424 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 SLC10A2Q12908 348 aaPredicted RBP20.21■□□□□ 0.83
SRSF1-206ENST00000583741 OASLQ15646 514 aaKnown RBP20.21■□□□□ 0.83
SRSF1-206ENST00000583741 ERCC6LQ2NKX8 1250 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 GLE1Q53GS7 698 aaKnown RBP20.21■□□□□ 0.83
SRSF1-206ENST00000583741 IYDQ6PHW0 289 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 KDELC2Q7Z4H8 507 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 ZC3H18Q86VM9 953 aaKnown RBP20.21■□□□□ 0.83
SRSF1-206ENST00000583741 LURAP1LQ8IV03 231 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 APOBEC4Q8WW27 367 aaKnown RBP20.21■□□□□ 0.83
SRSF1-206ENST00000583741 RNF31Q96EP0 1072 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 ZPBPQ9BS86 351 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 EFHD1Q9BUP0 239 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 FEZ2Q9UHY8 353 aaPredicted RBP20.21■□□□□ 0.83
SRSF1-206ENST00000583741 CNOT6Q9ULM6 557 aaKnown RBP20.21■□□□□ 0.83
SRSF1-206ENST00000583741 ZNF148Q9UQR1 794 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 PLAAQ9Y263 795 aa20.21■□□□□ 0.83
SRSF1-206ENST00000583741 H7C0C1 242 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 RAD51CO43502 376 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 PYGLP06737 847 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 RHOXF2BP0C7M4 288 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 STAT5AP42229 794 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 ATP5OP48047 213 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 XRCC4Q13426 336 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.2■□□□□ 0.82
SRSF1-206ENST00000583741 OLFM3Q96PB7 478 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 RHOXF2Q9BQY4 288 aa20.2■□□□□ 0.82
SRSF1-206ENST00000583741 SIDT1Q9NXL6 827 aaKnown RBP20.2■□□□□ 0.82
SRSF1-206ENST00000583741 VPS18Q9P253 973 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms