RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 KLHL32Q96NJ5 620 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 PLEKHG4BQ96PX9 1271 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 FAM111AQ96PZ2 611 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 SMIM14Q96QK8 99 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 SEMA4CQ9C0C4 833 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 ZDHHC6Q9H6R6 413 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 FBXO6Q9NRD1 293 aaPredicted RBP11.84□□□□□ -0.51
GGA3-217ENST00000583667 RAD18Q9NS91 495 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 MID2Q9UJV3 735 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 PPM1HQ9ULR3 514 aa11.84□□□□□ -0.51
GGA3-217ENST00000583667 C1orf232A0A0U1RR37 186 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 TBC1D3BA6NDS4 549 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 OR51F1A6NGY5 319 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 TARM1B6A8C7 271 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 ERVH48-1M5A8F1 160 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 GAPDHSO14556 408 aaPredicted RBP11.83□□□□□ -0.52
GGA3-217ENST00000583667 NDUFAB1O14561 156 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 BUD23O43709 281 aaKnown RBP11.83□□□□□ -0.52
GGA3-217ENST00000583667 TLX3O43711 291 aaPredicted RBP11.83□□□□□ -0.52
GGA3-217ENST00000583667 LEFTY1O75610 366 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 KLHL2O95198 593 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 KAT7O95251 611 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 UGT2B4P06133 528 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 CYP2A6P11509 494 aaPredicted RBP11.83□□□□□ -0.52
GGA3-217ENST00000583667 CTPS1P17812 591 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 FDXRP22570 491 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 MC4RP32245 332 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 PRKAA2P54646 552 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 SLC12A2P55011 1212 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 TMPRSS15P98073 1019 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 PTSQ03393 145 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 MESP2Q0VG99 397 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 ELAVL3Q14576 367 aaKnown RBP11.83□□□□□ -0.52
GGA3-217ENST00000583667 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 HECTD2Q5U5R9 776 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 ZNF549Q6P9A3 640 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 SNX20Q7Z614 316 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 CPLX4Q7Z7G2 160 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 CEP97Q8IW35 865 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 TMEM151AQ8N4L1 468 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 LRRC8CQ8TDW0 803 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 GPR78Q96P69 363 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 FAM129BQ96TA1 746 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 TTC1Q99614 292 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 AARSD1Q9BTE6 412 aaKnown RBP11.83□□□□□ -0.52
GGA3-217ENST00000583667 NSRP1Q9H0G5 558 aaKnown RBP11.83□□□□□ -0.52
GGA3-217ENST00000583667 MANSC1Q9H8J5 431 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 MLXIPLQ9NP71 852 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 IL26Q9NPH9 171 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 TMEM216Q9P0N5 145 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 FKBPLQ9UIM3 349 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 MMP17Q9ULZ9 603 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 SLC30A1Q9Y6M5 507 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 ANKRD36A6QL64 1941 aa11.83□□□□□ -0.52
GGA3-217ENST00000583667 UBR5O95071 2799 aaPredicted RBP11.83□□□□□ -0.52
GGA3-217ENST00000583667 KIAA1549LQ6ZVL6 1849 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 NPIPB15A6NHN6 443 aaPredicted RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 K7EQS6 105 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 PSMD11O00231 422 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 CCL22O00626 93 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 RRP8O43159 456 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 EDF1O60869 148 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 NDUFS3O75489 264 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 SRP72O76094 671 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 TGDSO95455 350 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 CLDN7O95471 211 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 ESR1P03372 595 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 APODP05090 189 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 CTSLP07711 333 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 VIMP08670 466 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 BPIP17213 487 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 RPS3P23396 243 aaKnown RBP eCLIP11.82□□□□□ -0.52
GGA3-217ENST00000583667 GRK2P25098 689 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 VIPR1P32241 457 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 SPAM1P38567 509 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 SKIV2L2P42285 1042 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 KPNA2P52292 529 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 SEC13P55735 322 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 DCDC1P59894 354 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 TIAL1Q01085 375 aaKnown RBP eCLIP11.82□□□□□ -0.52
GGA3-217ENST00000583667 ZNF234Q14588 700 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 ITIH4Q14624 930 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 PTPRRQ15256 657 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 GKAP1Q5VSY0 366 aaPredicted RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 ATG16L1Q676U5 607 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 DPPA4Q7L190 304 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 TAX1BP1Q86VP1 789 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 NLRP8Q86W28 1048 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 SPATS2Q86XZ4 545 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 SLC41A1Q8IVJ1 513 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 PIANPQ8IYJ0 282 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 CENPLQ8N0S6 344 aaPredicted RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 PLD6Q8N2A8 252 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 ARMC2Q8NEN0 867 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 GDAP1Q8TB36 358 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 SETD7Q8WTS6 366 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 OR8D1Q8WZ84 308 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.82□□□□□ -0.52
GGA3-217ENST00000583667 WBP1Q96G27 269 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 ELMO2Q96JJ3 720 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms