RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TTC13Q8NBP0 860 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 FDCSPQ8NFU4 85 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 UBXN4Q92575 508 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 SYN2Q92777 582 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-215ENST00000583328 PNPLA2Q96AD5 504 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 C19orf60Q96EN9 201 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 SLC41A2Q96JW4 573 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 CSPG4P5Q96PW8 444 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 LYSMD1Q96S90 227 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 SPATA16Q9BXB7 569 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 TDRD1Q9BXT4 1180 aaKnown RBP12.08□□□□□ -0.48
TOP3A-215ENST00000583328 PCDH9Q9HC56 1237 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 TRIM39Q9HCM9 518 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 SLC40A1Q9NP59 571 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 TRIM10Q9UDY6 481 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 TTLL3Q9Y4R7 772 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 SHANK1Q9Y566 2161 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 TNRC6AQ8NDV7 1962 aaKnown RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 IGHV5-51A0A0C4DH38 117 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 OR52A4PA6NMU1 304 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 KMOO15229 486 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 CEACAM4O75871 244 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 TMEM63AO94886 807 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 CBX6O95503 412 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 POU3F2P20265 443 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 RPL10P27635 214 aaKnown RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 IL1R2P27930 398 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 RPL26P61254 145 aaKnown RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 GPR18Q14330 331 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 IHHQ14623 411 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 ZNF569Q5MCW4 686 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 E4F1Q66K89 784 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 ABRAXAS1Q6UWZ7 409 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 ADGRG6Q86SQ4 1221 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 LRRTM4Q86VH4 590 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 SNRNP40Q96DI7 357 aaKnown RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 ZNF514Q96K75 400 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 MLPHQ9BV36 600 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 NUDT9Q9BW91 350 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 RAB33BQ9H082 229 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 WASH6PQ9NQA3 447 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 FGF21Q9NSA1 209 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 HAUS2Q9NVX0 235 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 RBM22Q9NW64 420 aaKnown RBP eCLIP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 SNX7Q9UNH6 387 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 RPL26L1Q9UNX3 145 aaKnown RBP12.07□□□□□ -0.48
TOP3A-215ENST00000583328 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 HIVEP3Q5T1R4 2406 aa12.07□□□□□ -0.48
TOP3A-215ENST00000583328 SSU72P8A0A1W2PR75 194 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 GPR89AB7ZAQ6 455 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 MFAP3LO75121 409 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 CPNE3O75131 537 aaKnown RBP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 JCHAINP01591 159 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 KLK3P07288 261 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 EBLN1P0CF75 366 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 GPR89BP0CG08 455 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 BRAFP15056 766 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 IDSP22304 550 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 CDC25BP30305 580 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 HNRNPH3P31942 346 aaKnown RBP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 PCK1P35558 622 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 DRG2P55039 364 aaKnown RBP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 PPP1CAP62136 330 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 KLHL30Q0D2K2 578 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 TBX2Q13207 712 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 LAMB3Q13751 1172 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 ELOAQ14241 798 aaKnown RBP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 QPCTQ16769 361 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 ZRANB3Q5FWF4 1079 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 CCDC122Q5T0U0 273 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 ALS2CLQ60I27 953 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 TMEM126BQ8IUX1 230 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 CNGA4Q8IV77 575 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 IQCKQ8N0W5 287 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 SLC34A3Q8N130 599 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 TTC30BQ8N4P2 665 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 CISD2Q8N5K1 135 aaKnown RBP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 DNAJC7Q99615 494 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 MAP3K3Q99759 626 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 TIMM29Q9BSF4 260 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 CHST8Q9H2A9 424 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 GPR83Q9NYM4 423 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 DTLQ9NZJ0 730 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 SEMA5BQ9P283 1151 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 BZW2Q9Y6E2 419 aaKnown RBP12.06□□□□□ -0.48
TOP3A-215ENST00000583328 DOPEY1Q5JWR5 2465 aa12.06□□□□□ -0.48
TOP3A-215ENST00000583328 CENPEQ02224 2701 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 ANKUB1A6NFN9 424 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 CHUKO15111 745 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 MATN3O15232 486 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 MTX2O75431 263 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 SCRG1O75711 98 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 FTLP02792 175 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-215ENST00000583328 RARAP10276 462 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 IL4RP24394 825 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 RIPPLY3P57055 190 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 NIPAL4Q0D2K0 466 aa12.05□□□□□ -0.48
TOP3A-215ENST00000583328 PLEKHN1Q494U1 663 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-215ENST00000583328 AGAP9Q5VTM2 703 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms