RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 SYCE1Q8N0S2 351 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 SFRP1Q8N474 314 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 FBXO39Q8N4B4 442 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 RNF10Q8N5U6 811 aaKnown RBP9.57□□□□□ -0.88
TOP3A-211ENST00000581536 UBL4BQ8N7F7 174 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 OR4K2Q8NGD2 314 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 WDR36Q8NI36 951 aaKnown RBP9.57□□□□□ -0.88
TOP3A-211ENST00000581536 WDR48Q8TAF3 677 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 ATG4AQ8WYN0 398 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 CCDC97Q96F63 343 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-211ENST00000581536 ZNF578Q96N58 590 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-211ENST00000581536 TMEM121Q9BTD3 319 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 FAM96AQ9H5X1 160 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 RMI1Q9H9A7 625 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 DNAJC16Q9Y2G8 782 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 SDK2Q58EX2 2172 aa9.57□□□□□ -0.88
TOP3A-211ENST00000581536 IGHV1OR21-1A0A087WYE8 117 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 A6NCN8 305 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 C5orf60A6NFR6 353 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 CDRT15L2A8MXV6 281 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 MIF4GDA9UHW6 222 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 TMEM229AB2RXF0 380 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 TERTO14746 1132 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 KMOO15229 486 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 STX7O15400 261 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 ANXA9O76027 345 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 PTMAP06454 111 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 CCL4P13236 92 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 ZNF7P17097 686 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 HLA-DPA1P20036 260 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 RPL10P27635 214 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 RBMS1P29558 406 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 CTSCP53634 463 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 NFATC2Q13469 925 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 BIRC2Q13490 618 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 NR1D2Q14995 579 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 C16orf72Q14CZ0 275 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 PHF19Q5T6S3 580 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 MEI1Q5TIA1 1274 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 ITPRIPL1Q6GPH6 555 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 LRRC69Q6ZNQ3 347 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 PRICKLE2Q7Z3G6 844 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 C11orf96Q7Z7L8 435 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 PDZD3Q86UT5 571 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 SLITRK4Q8IW52 837 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 SPACA3Q8IXA5 215 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 LSMEM2Q8N112 164 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 RASGEF1AQ8N9B8 481 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 OR13C4Q8NGS5 318 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 GDAP1Q8TB36 358 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 SLC35B2Q8TB61 432 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 ZNF398Q8TD17 642 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 C1orf54Q8WWF1 131 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 GRAMD1AQ96CP6 724 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 SPATA13Q96N96 652 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 PLEKHG4BQ96PX9 1271 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 VPS35Q96QK1 796 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 SRPK1Q96SB4 655 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 TBL1YQ9BQ87 522 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 TBC1D10AQ9BXI6 508 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 FSD1LQ9BXM9 530 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 TRABDQ9H4I3 376 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 LZTFL1Q9NQ48 299 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 RAD18Q9NS91 495 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 PIH1D1Q9NWS0 290 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 ZNF624Q9P2J8 865 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 NFKBIL1Q9UBC1 381 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 AAR2Q9Y312 384 aaKnown RBP9.56□□□□□ -0.88
TOP3A-211ENST00000581536 PCDHGA8Q9Y5G5 932 aa9.56□□□□□ -0.88
TOP3A-211ENST00000581536 SMG1Q96Q15 3661 aaKnown RBP9.55□□□□□ -0.88
TOP3A-211ENST00000581536 IGSF10Q6WRI0 2623 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 IGHV5-10-1A0A0J9YXX1 117 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 GLYATL1P3A0A0U1RQE8 302 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 GOLGA6L9A6NEM1 432 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 A8MU76 341 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 PLD2O14939 933 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 RRP8O43159 456 aaKnown RBP9.55□□□□□ -0.88
TOP3A-211ENST00000581536 KLK10O43240 276 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 POP7O75817 140 aaKnown RBP9.55□□□□□ -0.88
TOP3A-211ENST00000581536 CPNE6O95741 557 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 PRSS56P0CW18 603 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 BRAFP15056 766 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 LPOP22079 712 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-211ENST00000581536 SLC5A2P31639 672 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 CCKBRP32239 447 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 CSF2RBP32927 897 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 SPAM1P38567 509 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 TNNT3P45378 269 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-211ENST00000581536 ABCG1P45844 678 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 GPR3P46089 330 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 FASLGP48023 281 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 CDKN1CP49918 316 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-211ENST00000581536 MAPK10P53779 464 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 DRG2P55039 364 aaKnown RBP9.55□□□□□ -0.88
TOP3A-211ENST00000581536 GSDMDP57764 484 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 ERVPABLB-1P60509 514 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 CCZ1BP86790 482 aa9.55□□□□□ -0.88
TOP3A-211ENST00000581536 CCZ1P86791 482 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-211ENST00000581536 XIAPP98170 497 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms