RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 FBN2P35556 2912 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 GPR89AB7ZAQ6 455 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 HLA-DQB2P05538 268 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 GPR89BP0CG08 455 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 CA4P22748 312 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 PDE1BQ01064 536 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 ACY1Q03154 408 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 GALNT2Q10471 571 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 KHDC1Q4VXA5 237 aaKnown RBP18.74■□□□□ 0.59
NDEL1-209ENST00000580738 AGAP9Q5VTM2 703 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 WASH2PQ6VEQ5 465 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 ZNF517Q6ZMY9 492 aaPredicted RBP18.74■□□□□ 0.59
NDEL1-209ENST00000580738 RHOT1Q8IXI2 618 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 RBM12BQ8IXT5 1001 aaKnown RBP18.74■□□□□ 0.59
NDEL1-209ENST00000580738 GLYATL1Q969I3 302 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 SNRNP40Q96DI7 357 aaKnown RBP18.74■□□□□ 0.59
NDEL1-209ENST00000580738 ZNF514Q96K75 400 aaPredicted RBP18.74■□□□□ 0.59
NDEL1-209ENST00000580738 TIMM29Q9BSF4 260 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 NUP62CLQ9H1M0 184 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 CHST8Q9H2A9 424 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 WASH6PQ9NQA3 447 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 LIMA1Q9UHB6 759 aaKnown RBP18.74■□□□□ 0.59
NDEL1-209ENST00000580738 SCINQ9Y6U3 715 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 OTOGQ6ZRI0 2925 aa18.74■□□□□ 0.59
NDEL1-209ENST00000580738 CPNE3O75131 537 aaKnown RBP18.73■□□□□ 0.59
NDEL1-209ENST00000580738 SCRG1O75711 98 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 TMEM63AO94886 807 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 MMP2P08253 660 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 CD48P09326 243 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 IDSP22304 550 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 VARSP26640 1264 aaKnown RBP18.73■□□□□ 0.59
NDEL1-209ENST00000580738 ITGA1P56199 1179 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 PLEKHN1Q494U1 663 aaPredicted RBP18.73■□□□□ 0.59
NDEL1-209ENST00000580738 IZUMO3Q5VZ72 239 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 BPHLQ86WA6 291 aaPredicted RBP18.73■□□□□ 0.59
NDEL1-209ENST00000580738 TEKT4Q8WW24 435 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 ZSCAN5AQ9BUG6 496 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 ZFYVE1Q9HBF4 777 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 ASF1BQ9NVP2 202 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 SHOC2Q9UQ13 582 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 SLC5A6Q9Y289 635 aa18.73■□□□□ 0.59
NDEL1-209ENST00000580738 SSU72P8A0A1W2PR75 194 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 CDK14O94921 469 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 JCHAINP01591 159 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 PIRTP0C851 137 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 FECHP22830 423 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 CD86P42081 329 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 ARL4DP49703 201 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 RAPSNQ13702 412 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 GALNT3Q14435 633 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 GPR19Q15760 415 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 CCDC122Q5T0U0 273 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 FAM182AQ5T1J6 154 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 PRAMEF17Q5VTA0 474 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 ZNF571Q7Z3V5 609 aaPredicted RBP18.72■□□□□ 0.59
NDEL1-209ENST00000580738 C11orf96Q7Z7L8 435 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 TMEM126BQ8IUX1 230 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 CISD2Q8N5K1 135 aaKnown RBP18.72■□□□□ 0.59
NDEL1-209ENST00000580738 TRAM1L1Q8N609 369 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 ENDOVQ8N8Q3 282 aaKnown RBP18.72■□□□□ 0.59
NDEL1-209ENST00000580738 GPR150Q8NGU9 434 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 C5orf34Q96MH7 638 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 RANBP9Q96S59 729 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 NUP85Q9BW27 656 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 HAUS4Q9H6D7 363 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 AMACRQ9UHK6 382 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 TMPRSS11EQ9UL52 423 aa18.72■□□□□ 0.59
NDEL1-209ENST00000580738 DDX3XO00571 662 aaKnown RBP eCLIP18.71■□□□□ 0.594e-14■□□□□ 8.4
NDEL1-209ENST00000580738 SLC4A1P02730 911 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 GZMAP12544 262 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 CCNCP24863 283 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 ELAVL4P26378 380 aaKnown RBP18.71■□□□□ 0.59
NDEL1-209ENST00000580738 TUBB4BP68371 445 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 HSD11B2P80365 405 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 SLC25A11Q02978 314 aaKnown RBP18.71■□□□□ 0.59
NDEL1-209ENST00000580738 TUBB2AQ13885 445 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 KRT81Q14533 505 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 NCBP2-AS2Q69YL0 99 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 TIGD7Q6NT04 549 aaPredicted RBP18.71■□□□□ 0.59
NDEL1-209ENST00000580738 APTXQ7Z2E3 356 aaKnown RBP18.71■□□□□ 0.59
NDEL1-209ENST00000580738 D2HGDHQ8N465 521 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 TTC30BQ8N4P2 665 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 TSGA13Q96PP4 275 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 PHF12Q96QT6 1004 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 TUBB2BQ9BVA1 445 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 MRPL47Q9HD33 250 aaKnown RBP18.71■□□□□ 0.59
NDEL1-209ENST00000580738 KCND1Q9NSA2 647 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 GPR83Q9NYM4 423 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 TCFL5Q9UL49 500 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 SNX7Q9UNH6 387 aa18.71■□□□□ 0.59
NDEL1-209ENST00000580738 LRRC10BA6NIK2 292 aa18.7■□□□□ 0.58
NDEL1-209ENST00000580738 LRRC53A6NM62 1247 aa18.7■□□□□ 0.58
NDEL1-209ENST00000580738 VEGFDO43915 354 aa18.7■□□□□ 0.58
NDEL1-209ENST00000580738 DCDC1P59894 354 aa18.7■□□□□ 0.58
NDEL1-209ENST00000580738 PAFAH1B3Q15102 231 aaKnown RBP18.7■□□□□ 0.58
NDEL1-209ENST00000580738 IFI16Q16666 785 aaKnown RBP18.7■□□□□ 0.58
NDEL1-209ENST00000580738 ZRANB3Q5FWF4 1079 aa18.7■□□□□ 0.58
NDEL1-209ENST00000580738 DNTTIP2Q5QJE6 756 aaKnown RBP18.7■□□□□ 0.58
NDEL1-209ENST00000580738 PLEKHS1Q5SXH7 462 aa18.7■□□□□ 0.58
NDEL1-209ENST00000580738 E4F1Q66K89 784 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms