RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 GPR150Q8NGU9 434 aa13.72□□□□□ -0.21
CSNK1D-213ENST00000580446 GPT2Q8TD30 523 aa13.72□□□□□ -0.21
CSNK1D-213ENST00000580446 LRFN5Q96NI6 719 aa13.72□□□□□ -0.21
CSNK1D-213ENST00000580446 TSG101Q99816 390 aa13.72□□□□□ -0.21
CSNK1D-213ENST00000580446 SEMA5BQ9P283 1151 aa13.72□□□□□ -0.21
CSNK1D-213ENST00000580446 EPHA6Q9UF33 1036 aa13.72□□□□□ -0.21
CSNK1D-213ENST00000580446 TMEM59LQ9UK28 342 aa13.72□□□□□ -0.21
CSNK1D-213ENST00000580446 PCDHGC3Q9UN70 934 aa13.72□□□□□ -0.21
CSNK1D-213ENST00000580446 FADS2P1A8MWK0 482 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 WASH4PA8MWX3 477 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 TMEM150CB9EJG8 249 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 SLC19A2O60779 497 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 SLCO2B1O94956 709 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 CYP2A6P11509 494 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 ADSLP30566 484 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 KRT9P35527 623 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 FOLR3P41439 243 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 YBEYP58557 167 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 FKBP3Q00688 224 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 ZNF789Q5FWF6 425 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 AGAP7PQ5VUJ5 663 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 FCRL6Q6DN72 434 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 EXD1Q8NHP7 514 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 CXorf40BQ96DE9 158 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 AGAP4Q96P64 663 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 CRACR2AQ9BSW2 395 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 CBX8Q9HC52 389 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 SLC6A20Q9NP91 592 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 PLA2G3Q9NZ20 509 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 DTLQ9NZJ0 730 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 ATXN10Q9UBB4 475 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 PLEKHA6Q9Y2H5 1048 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 PADI2Q9Y2J8 665 aa13.71□□□□□ -0.21
CSNK1D-213ENST00000580446 CACNA1CQ13936 2221 aa13.71□□□□□ -0.22
CSNK1D-213ENST00000580446 MXRA5Q9NR99 2828 aa13.71□□□□□ -0.22
CSNK1D-213ENST00000580446 CBSLP0DN79 551 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 CYP2A7P20853 494 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 CBSP35520 551 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 PMP22Q01453 160 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 CETN1Q12798 172 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 SSPNQ14714 243 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.7□□□□□ -0.222e-7■■■■□ 21.4
CSNK1D-213ENST00000580446 CCDC14Q49A88 953 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 IGFL2Q6UWQ7 119 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 C3P1Q6ZMU1 363 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 ZDHHC17Q8IUH5 632 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 AVL9Q8NBF6 648 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 RXFP2Q8WXD0 754 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 C18orf8Q96DM3 657 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 TRIM56Q9BRZ2 755 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 SLC39A8Q9C0K1 460 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 SLC7A5P2Q9GIP4 190 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 KLHL25Q9H0H3 589 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 OR2AG1Q9H205 316 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 LRRC19Q9H756 370 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 VPS18Q9P253 973 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 ADAM21Q9UKJ8 722 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 WDR37Q9Y2I8 494 aa13.7□□□□□ -0.22
CSNK1D-213ENST00000580446 PSMD11O00231 422 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 HTRA2O43464 458 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 KLHL41O60662 606 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 KLHL18O94889 574 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 UMODP07911 640 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 AGAP20933 346 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 IL4RP24394 825 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 SOX8P57073 446 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 SNX16P57768 344 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 PTSQ03393 145 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 CUL4AQ13619 759 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 INSCQ1MX18 579 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 TAF3Q5VWG9 929 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 UMODL1-AS1Q8N2C9 162 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 JOSD2Q8TAC2 188 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 TREX2Q9BQ50 279 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 EPS8L2Q9H6S3 715 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 NOD2Q9HC29 1040 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 POT1Q9NUX5 634 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 KCTD5Q9NXV2 234 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 CNTRLQ7Z7A1 2325 aa13.69□□□□□ -0.22
CSNK1D-213ENST00000580446 TLCD2A6NGC4 264 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 DFFAO00273 331 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 PMM2O15305 246 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 NUAK1O60285 661 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 CASP6P55212 293 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 MAXP61244 160 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 AP1S1P61966 158 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 AIMP2Q13155 320 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 PLCL1Q15111 1095 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 PRAMEF13Q5VWM6 474 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 ZNF385CQ66K41 422 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 B4GALNT4Q76KP1 1039 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 EPS8L1Q8TE68 723 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 IP6K3Q96PC2 410 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 WDR24Q96S15 920 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 ZNF559Q9BR84 538 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 MESP1Q9BRJ9 268 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 RAB33BQ9H082 229 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms