RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 DPPA4Q7L190 304 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 NPAS3Q8IXF0 933 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 KYQ8NBH2 561 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 CHST14Q8NCH0 376 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 RBM15BQ8NDT2 890 aaKnown RBP10.99□□□□□ -0.65
SKA2-204ENST00000578519 GPR26Q8NDV2 337 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 MAPK15Q8TD08 544 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 ATP6V1E2Q96A05 226 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 EID2BQ96D98 161 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 MRPL38Q96DV4 380 aaKnown RBP10.99□□□□□ -0.65
SKA2-204ENST00000578519 HIST1H2AHQ96KK5 128 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 MRGPRX3Q96LB0 322 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 ANKRD27Q96NW4 1050 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 OR52B2Q96RD2 323 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 HIST1H2AJQ99878 128 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 H2AFJQ9BTM1 129 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 THTPAQ9BU02 230 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 ZCCHC2Q9C0B9 1178 aaKnown RBP10.99□□□□□ -0.65
SKA2-204ENST00000578519 WDR55Q9H6Y2 383 aaPredicted RBP10.99□□□□□ -0.65
SKA2-204ENST00000578519 TMEM45AQ9NWC5 275 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 CDH7Q9ULB5 785 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 FIS1Q9Y3D6 152 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 WASF2Q9Y6W5 498 aa10.99□□□□□ -0.65
SKA2-204ENST00000578519 IGLV3-16A0A075B6K0 115 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 C16orf96A6NNT2 1141 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 TTC34A8MYJ7 566 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 NRG2O14511 850 aaPredicted RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 FKBP6O75344 327 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 KATNA1O75449 491 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 SKAP2O75563 359 aaPredicted RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 STAMBPO95630 424 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 ESRRBO95718 433 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 OTCP00480 354 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 ANXA5P08758 320 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 GSTM1P09488 218 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 ATP1B2P14415 290 aaPredicted RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 TIMP2P16035 220 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 LBPP18428 481 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 CYP2A7P20853 494 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 KCNA5P22460 613 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 TIE1P35590 1138 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 MAGEA10P43363 369 aaPredicted RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 CPA2P48052 419 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 KCNC1P48547 511 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 CDKL1Q00532 357 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 GSTM4Q03013 218 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 GRIK2Q13002 908 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 TGFBIQ15582 683 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 CCDC6Q16204 474 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 GSTA3Q16772 222 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 MMEL1Q495T6 779 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 SETMARQ53H47 684 aaPredicted RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 C9orf50Q5SZB4 431 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 GPRC6AQ5T6X5 926 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 GPRIN3Q6ZVF9 776 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 CHSY3Q70JA7 882 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 ADGRD2Q7Z7M1 963 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 TSPAN33Q86UF1 283 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 C12orf76Q8N812 135 aaPredicted RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 RIN3Q8TB24 985 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 TRPC4APQ8TEL6 797 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 ZNF483Q8TF39 744 aaPredicted RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 CYB5D2Q8WUJ1 264 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 SUSD6Q92537 303 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 JADE3Q92613 823 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 FGF13Q92913 245 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 RAB7BQ96AH8 199 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 FAM136AQ96C01 138 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 C19orf60Q96EN9 201 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 RIPOR3Q96MK2 946 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 FAM161BQ96MY7 647 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 CATSPER2Q96P56 530 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 LENG8Q96PV6 779 aaPredicted RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 SMIM14Q96QK8 99 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 ZNF382Q96SR6 550 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 EGFL8Q99944 293 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 SLC25A23Q9BV35 468 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 NKX2-4Q9H2Z4 354 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 ZBTB26Q9HCK0 441 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 UTP6Q9NYH9 597 aaKnown RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 NOP53Q9NZM5 478 aaKnown RBP10.98□□□□□ -0.65
SKA2-204ENST00000578519 STOML1Q9UBI4 398 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 MED16Q9Y2X0 877 aa10.98□□□□□ -0.65
SKA2-204ENST00000578519 HELZP42694 1942 aaKnown RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 LOC100653049A0A140TA62 436 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 TBC1D3BA6NDS4 549 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 BBIP1A8MTZ0 92 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 A8MX80 341 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 PSMD12O00232 456 aaPredicted RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 KPNA3O00505 521 aaPredicted RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 GAPDHSO14556 408 aaPredicted RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 WNT9AO14904 365 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 FFAR2O15552 330 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 RNASEH1O60930 286 aaKnown RBP10.97□□□□□ -0.65
SKA2-204ENST00000578519 KRT34O76011 436 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 CDK14O94921 469 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 TSPAN12O95859 305 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 C1SP09871 688 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ELFN1P0C7U0 828 aa10.97□□□□□ -0.65
SKA2-204ENST00000578519 ITGB7P26010 798 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms