RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	CPNE6	O95741	557 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	GAS8	O95995	478 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	MPO	P05164	745 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ETS1	P14921	441 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TPH1	P17752	444 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CD1C	P29017	333 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ALDH4A1	P30038	563 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CA5A	P35218	305 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	MLLT3	P42568	568 aa	Predicted RBP	13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	INHBC	P55103	352 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	OR1D5	P58170	312 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ERVPABLB-1	P60509	514 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CXADR	P78310	365 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	GABRE	P78334	506 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	GPLD1	P80108	840 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	DMPK	Q09013	629 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CDH17	Q12864	832 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	LAMB3	Q13751	1172 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	GPR33	Q49SQ1	333 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	AGAP9	Q5VTM2	703 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ABRAXAS1	Q6UWZ7	409 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SNX20	Q7Z614	316 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SLC9B2	Q86UD5	537 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TRAPPC5	Q8IUR0	188 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PRELID2	Q8N945	189 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RASGEF1A	Q8N9B8	481 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	OR13C4	Q8NGS5	318 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	WDR36	Q8NI36	951 aa	Known RBP	13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	HEXDC	Q8WVB3	486 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ULK4	Q96C45	1275 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ZNF578	Q96N58	590 aa	Predicted RBP	13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	DPYSL5	Q9BPU6	564 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	STRADB	Q9C0K7	418 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	STN1	Q9H668	368 aa	Known RBP	13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ASB8	Q9H765	288 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SYNDIG1	Q9H7V2	258 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	UCK1	Q9HA47	277 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RAB6B	Q9NRW1	208 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	NLE1	Q9NVX2	485 aa	Predicted RBP	13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SATB2	Q9UPW6	733 aa		13.43	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	IGHV1OR21-1	A0A087WYE8	117 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501		A0A1W2PNU3	283 aa	Predicted RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	KIF5C	O60282	957 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SNX2	O60749	519 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	XRCC1	P18887	633 aa	Predicted RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	MSH3	P20585	1137 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ITGAL	P20701	1170 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RPL22	P35268	128 aa	Known RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	LMAN1	P49257	510 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	HHEX	Q03014	270 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TLE3	Q04726	772 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	POU6F1	Q14863	301 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SKIDA1	Q1XH10	827 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TBC1D25	Q3MII6	688 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	B3GNT8	Q7Z7M8	397 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PIM3	Q86V86	326 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	AMZ2	Q86W34	360 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SLITRK4	Q8IW52	837 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TAB3	Q8N5C8	712 aa	Predicted RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	DNAAF3	Q8N9W5	541 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	GLIS1	Q8NBF1	620 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	OR52K1	Q8NGK4	314 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PRR11	Q96HE9	360 aa	Predicted RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	DNAJC1	Q96KC8	554 aa	Known RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SLC46A1	Q96NT5	459 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RANBP9	Q96S59	729 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	NAP1L3	Q99457	506 aa	Predicted RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	SLC38A3	Q99624	504 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	OSGEPL1	Q9H4B0	414 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CASS4	Q9NQ75	786 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PRDM8	Q9NQV8	689 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	EIF2B3	Q9NR50	452 aa	Known RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	KCNK4	Q9NYG8	393 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CPNE7	Q9UBL6	633 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RIMKLB	Q9ULI2	386 aa		13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.42	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ZFC3H1	O60293	1989 aa	Known RBP	13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	PTPRQ	Q9UMZ3	2332 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TRBV23OR9-2	A0A075B6M9	112 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TRBV5-4	A0A0C4DH59	114 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501		B8ZZF3	427 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CES2	O00748	559 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	POP7	O75817	140 aa	Known RBP	13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	APRT	P07741	180 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	ZSCAN5DP	P0CG00	497 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	RALB	P11234	206 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	IDS	P22304	550 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	AKT1	P31749	480 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	CTSC	P53634	463 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	EPHA4	P54764	986 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	UCN	P55089	124 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	UBE2I	P63279	158 aa	Known RBP	13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TMPRSS15	P98073	1019 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	AMZ1	Q400G9	498 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	MAP9	Q49MG5	647 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	BCL7A	Q4VC05	210 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	C3orf38	Q5JPI3	329 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	BROX	Q5VW32	411 aa		13.41	□□□□□ -0.26
CSNK1D-208	ENST00000578501	TMEM220	Q6QAJ8	160 aa		13.41	□□□□□ -0.26

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