RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 TRIM72Q6ZMU5 477 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 BNC2Q6ZN30 1099 aaPredicted RBP13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 MRGPREQ86SM8 312 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 ZNF677Q86XU0 584 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 MMP21Q8N119 569 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 D2HGDHQ8N465 521 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 FAR1Q8WVX9 515 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 CPT1BQ92523 772 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 ZNF501Q96CX3 271 aaPredicted RBP13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 CLIP3Q96DZ5 547 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 FER1L6-AS2Q96M78 137 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 TRAPPC9Q96Q05 1148 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 WDR77Q9BQA1 342 aaPredicted RBP13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 MGME1Q9BQP7 344 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 ZBTB20Q9HC78 741 aaPredicted RBP13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 ARFGAP3Q9NP61 516 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 FAM207AQ9NSI2 230 aaPredicted RBP13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 SLC23A2Q9UGH3 650 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 NOVA2Q9UNW9 492 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 AP4E1Q9UPM8 1137 aa13.81□□□□□ -0.2
PPP4R1-206ENST00000577779 ACANP16112 2415 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 A0A0J9YYE9 177 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 UBA6A0AVT1 1052 aaPredicted RBP13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 GOLGA6L4A6NEF3 574 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 PRICKLE3O43900 615 aaPredicted RBP13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 TRBC1P01850 177 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 BRAFP15056 766 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 ERCC2P18074 760 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 CAPN3P20807 821 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 SSTR2P30874 369 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 EPHB1P54762 984 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 NCF4Q15080 339 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 RALGPS1Q5JS13 557 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 DNTTIP2Q5QJE6 756 aaKnown RBP13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 DCAF10Q5QP82 559 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 TMTC4Q5T4D3 741 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 PRAMEF17Q5VTA0 474 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 DPY19L2P1Q6NXN4 242 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 KLHL35Q6PF15 583 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 RFX8Q6ZV50 586 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 HSCBQ8IWL3 235 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 SYTL1Q8IYJ3 562 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 ZNF295-AS1Q8N0V1 137 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 BBS5Q8N3I7 341 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 RELTQ969Z4 430 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 HDAC11Q96DB2 347 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 TIGD1Q96MW7 591 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 IP6K3Q96PC2 410 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 WDR24Q96S15 920 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 DHX35Q9H5Z1 703 aaKnown RBP13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 ADAM22Q9P0K1 906 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 NOCTQ9UK39 431 aaKnown RBP13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 DNPEPQ9ULA0 475 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 ZDHHC9Q9Y397 364 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 CSAG2Q9Y5P2 127 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 ADGRG1Q9Y653 693 aa13.8□□□□□ -0.2
PPP4R1-206ENST00000577779 A0A1W2PQJ5 194 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 TLCD2A6NGC4 264 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 SIGLEC16A6NMB1 481 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 CLDN7O95471 211 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 NADKO95544 446 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 IGHEP01854 428 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 ZNF7P17097 686 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 RORAP35398 523 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 NSFP46459 744 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 DRG2P55039 364 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 KRTAP10-9P60411 292 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 CDR2Q01850 454 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 PTP4A2Q12974 167 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 CA9Q16790 459 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 ZNF648Q5T619 568 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 HENMT1Q5T8I9 393 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 ABRAXAS1Q6UWZ7 409 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 C3orf20Q8ND61 904 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 CD180Q99467 661 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 VPS16Q9H269 839 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 FAM83DQ9H4H8 585 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 SUCOQ9UBS9 1254 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 PADI2Q9Y2J8 665 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 ATP6V1DQ9Y5K8 247 aa13.79□□□□□ -0.2
PPP4R1-206ENST00000577779 EIF3CLB5ME19 914 aaKnown RBP13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 C9J4A7 227 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 F8VZ95 297 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 PEX12O00623 359 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 KMOO15229 486 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 FZD6O60353 706 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 PEX11BO96011 259 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 DESP17661 470 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 CHRNB2P17787 502 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 FECHP22830 423 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 TSFMP43897 325 aaKnown RBP13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 GSCP56915 257 aaPredicted RBP13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 FMO1Q01740 532 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 CDC16Q13042 620 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 HIF1AQ16665 826 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 KLHDC7AQ5VTJ3 777 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 AGAP9Q5VTM2 703 aa13.78□□□□□ -0.2
PPP4R1-206ENST00000577779 SPOCD1Q6ZMY3 1216 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms