RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 C1QL3Q5VWW1 255 aa8.83□□□□□ -1
SMG6-218ENST00000575454 FAM199XQ6PEV8 388 aaPredicted RBP8.83□□□□□ -1
SMG6-218ENST00000575454 ZNF517Q6ZMY9 492 aaPredicted RBP8.83□□□□□ -1
SMG6-218ENST00000575454 ADGRG6Q86SQ4 1221 aa8.83□□□□□ -1
SMG6-218ENST00000575454 TMEM126BQ8IUX1 230 aa8.83□□□□□ -1
SMG6-218ENST00000575454 TRAM1L1Q8N609 369 aa8.83□□□□□ -1
SMG6-218ENST00000575454 Q8NA96 180 aa8.83□□□□□ -1
SMG6-218ENST00000575454 FDCSPQ8NFU4 85 aa8.83□□□□□ -1
SMG6-218ENST00000575454 TEKT4Q8WW24 435 aa8.83□□□□□ -1
SMG6-218ENST00000575454 TM9SF4Q92544 642 aa8.83□□□□□ -1
SMG6-218ENST00000575454 HSPH1Q92598 858 aa8.83□□□□□ -1
SMG6-218ENST00000575454 GLYATL1Q969I3 302 aa8.83□□□□□ -1
SMG6-218ENST00000575454 RNF31Q96EP0 1072 aa8.83□□□□□ -1
SMG6-218ENST00000575454 TCTN2Q96GX1 697 aa8.83□□□□□ -1
SMG6-218ENST00000575454 SMIM14Q96QK8 99 aa8.83□□□□□ -1
SMG6-218ENST00000575454 SMAD5Q99717 465 aaKnown RBP8.83□□□□□ -1
SMG6-218ENST00000575454 SPATA16Q9BXB7 569 aa8.83□□□□□ -1
SMG6-218ENST00000575454 MFRPQ9BY79 579 aa8.83□□□□□ -1
SMG6-218ENST00000575454 ZFYVE1Q9HBF4 777 aa8.83□□□□□ -1
SMG6-218ENST00000575454 KCND1Q9NSA2 647 aa8.83□□□□□ -1
SMG6-218ENST00000575454 RBM22Q9NW64 420 aaKnown RBP eCLIP8.83□□□□□ -1
SMG6-218ENST00000575454 MYO6Q9UM54 1294 aa8.83□□□□□ -1
SMG6-218ENST00000575454 DNAJC16Q9Y2G8 782 aa8.83□□□□□ -1
SMG6-218ENST00000575454 SCN8AQ9UQD0 1980 aa8.82□□□□□ -1
SMG6-218ENST00000575454 DNHD1Q96M86 4753 aa8.82□□□□□ -1
SMG6-218ENST00000575454 F8P00451 2351 aa8.82□□□□□ -1
SMG6-218ENST00000575454 IGHV5-51A0A0C4DH38 117 aa8.82□□□□□ -1
SMG6-218ENST00000575454 UBA6A0AVT1 1052 aaPredicted RBP8.82□□□□□ -1
SMG6-218ENST00000575454 ANKUB1A6NFN9 424 aa8.82□□□□□ -1
SMG6-218ENST00000575454 TLCD2A6NGC4 264 aa8.82□□□□□ -1
SMG6-218ENST00000575454 OR52A4PA6NMU1 304 aa8.82□□□□□ -1
SMG6-218ENST00000575454 LGALS16A8MUM7 142 aa8.82□□□□□ -1
SMG6-218ENST00000575454 MAP3K7O43318 606 aa8.82□□□□□ -1
SMG6-218ENST00000575454 CDK14O94921 469 aa8.82□□□□□ -1
SMG6-218ENST00000575454 ZBTB11O95625 1053 aaPredicted RBP8.82□□□□□ -1
SMG6-218ENST00000575454 FTLP02792 175 aaPredicted RBP8.82□□□□□ -1
SMG6-218ENST00000575454 GZMAP12544 262 aa8.82□□□□□ -1
SMG6-218ENST00000575454 BRAFP15056 766 aa8.82□□□□□ -1
SMG6-218ENST00000575454 MX2P20592 715 aa8.82□□□□□ -1
SMG6-218ENST00000575454 FECHP22830 423 aa8.82□□□□□ -1
SMG6-218ENST00000575454 CCNCP24863 283 aa8.82□□□□□ -1
SMG6-218ENST00000575454 RPL10P27635 214 aaKnown RBP8.82□□□□□ -1
SMG6-218ENST00000575454 PTGIRP43119 386 aa8.82□□□□□ -1
SMG6-218ENST00000575454 PER3P56645 1201 aa8.82□□□□□ -1
SMG6-218ENST00000575454 DSC2Q02487 901 aa8.82□□□□□ -1
SMG6-218ENST00000575454 UBXN1Q04323 297 aa8.82□□□□□ -1
SMG6-218ENST00000575454 GALNT2Q10471 571 aa8.82□□□□□ -1
SMG6-218ENST00000575454 LAMB3Q13751 1172 aa8.82□□□□□ -1
SMG6-218ENST00000575454 GTF2H3Q13889 308 aa8.82□□□□□ -1
SMG6-218ENST00000575454 KRT81Q14533 505 aa8.82□□□□□ -1
SMG6-218ENST00000575454 QPCTQ16769 361 aa8.82□□□□□ -1
SMG6-218ENST00000575454 PRR30Q53SZ7 412 aaPredicted RBP8.82□□□□□ -1
SMG6-218ENST00000575454 DNTTIP2Q5QJE6 756 aaKnown RBP8.82□□□□□ -1
SMG6-218ENST00000575454 VWA5B1Q5TIE3 1220 aa8.82□□□□□ -1
SMG6-218ENST00000575454 LYPLAL1Q5VWZ2 237 aa8.82□□□□□ -1
SMG6-218ENST00000575454 CRTC3Q6UUV7 619 aa8.82□□□□□ -1
SMG6-218ENST00000575454 SRRM1Q8IYB3 904 aaKnown RBP8.82□□□□□ -1
SMG6-218ENST00000575454 D2HGDHQ8N465 521 aa8.82□□□□□ -1
SMG6-218ENST00000575454 RBMXL3Q8N7X1 1067 aaKnown RBP8.82□□□□□ -1
SMG6-218ENST00000575454 ARRDC2Q8TBH0 407 aa8.82□□□□□ -1
SMG6-218ENST00000575454 ADAMTS17Q8TE56 1095 aa8.82□□□□□ -1
SMG6-218ENST00000575454 CPT1BQ92523 772 aa8.82□□□□□ -1
SMG6-218ENST00000575454 MAML1Q92585 1016 aa8.82□□□□□ -1
SMG6-218ENST00000575454 SNRNP40Q96DI7 357 aaKnown RBP8.82□□□□□ -1
SMG6-218ENST00000575454 SGSM3Q96HU1 749 aa8.82□□□□□ -1
SMG6-218ENST00000575454 IP6K3Q96PC2 410 aa8.82□□□□□ -1
SMG6-218ENST00000575454 TSGA13Q96PP4 275 aa8.82□□□□□ -1
SMG6-218ENST00000575454 SRPK1Q96SB4 655 aaKnown RBP8.82□□□□□ -1
SMG6-218ENST00000575454 NUDT9Q9BW91 350 aa8.82□□□□□ -1
SMG6-218ENST00000575454 NLNQ9BYT8 704 aa8.82□□□□□ -1
SMG6-218ENST00000575454 AKIRIN1Q9H9L7 192 aaPredicted RBP8.82□□□□□ -1
SMG6-218ENST00000575454 FANCEQ9HB96 536 aa8.82□□□□□ -1
SMG6-218ENST00000575454 LATS2Q9NRM7 1088 aa8.82□□□□□ -1
SMG6-218ENST00000575454 TAS2R14Q9NYV8 317 aa8.82□□□□□ -1
SMG6-218ENST00000575454 NFKBIL1Q9UBC1 381 aaPredicted RBP8.82□□□□□ -1
SMG6-218ENST00000575454 SLC23A2Q9UGH3 650 aa8.82□□□□□ -1
SMG6-218ENST00000575454 TCFL5Q9UL49 500 aa8.82□□□□□ -1
SMG6-218ENST00000575454 B3GNT3Q9Y2A9 372 aa8.82□□□□□ -1
SMG6-218ENST00000575454 TTLL3Q9Y4R7 772 aa8.82□□□□□ -1
SMG6-218ENST00000575454 APCP25054 2843 aa8.82□□□□□ -1
SMG6-218ENST00000575454 TACC2O95359 2948 aa8.82□□□□□ -1
SMG6-218ENST00000575454 LRRC10BA6NIK2 292 aa8.81□□□□□ -1
SMG6-218ENST00000575454 A6NL46 340 aa8.81□□□□□ -1
SMG6-218ENST00000575454 MEN1O00255 615 aa8.81□□□□□ -1
SMG6-218ENST00000575454 ZNF185O15231 689 aa8.81□□□□□ -1
SMG6-218ENST00000575454 ATMINO43313 823 aaPredicted RBP8.81□□□□□ -1
SMG6-218ENST00000575454 KRT86O43790 486 aa8.81□□□□□ -1
SMG6-218ENST00000575454 IPO13O94829 963 aaKnown RBP8.81□□□□□ -1
SMG6-218ENST00000575454 EBLN1P0CF75 366 aa8.81□□□□□ -1
SMG6-218ENST00000575454 RARAP10276 462 aa8.81□□□□□ -1
SMG6-218ENST00000575454 IL1R2P27930 398 aa8.81□□□□□ -1
SMG6-218ENST00000575454 DRG2P55039 364 aaKnown RBP8.81□□□□□ -1
SMG6-218ENST00000575454 ITGA1P56199 1179 aa8.81□□□□□ -1
SMG6-218ENST00000575454 ADCY2Q08462 1091 aa8.81□□□□□ -1
SMG6-218ENST00000575454 PIGHQ14442 188 aaPredicted RBP8.81□□□□□ -1
SMG6-218ENST00000575454 KCNAB1Q14722 419 aa8.81□□□□□ -1
SMG6-218ENST00000575454 PLCL1Q15111 1095 aa8.81□□□□□ -1
SMG6-218ENST00000575454 IFI16Q16666 785 aaKnown RBP8.81□□□□□ -1
SMG6-218ENST00000575454 SMTNL2Q2TAL5 461 aa8.81□□□□□ -1
SMG6-218ENST00000575454 PLA2G4EQ3MJ16 856 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms