RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 AKTIPQ9H8T0 292 aa9.5□□□□□ -0.89
CCDC40-212ENST00000574799 IL37Q9NZH6 218 aa9.5□□□□□ -0.89
CCDC40-212ENST00000574799 CD300AQ9UGN4 299 aa9.5□□□□□ -0.89
CCDC40-212ENST00000574799 AKT3Q9Y243 479 aa9.5□□□□□ -0.89
CCDC40-212ENST00000574799 TIMM22Q9Y584 194 aa9.5□□□□□ -0.89
CCDC40-212ENST00000574799 C5orf42Q9H799 3197 aa9.5□□□□□ -0.89
CCDC40-212ENST00000574799 USP34Q70CQ2 3546 aa9.5□□□□□ -0.89
CCDC40-212ENST00000574799 CPNE3O75131 537 aaKnown RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 PRKD3O94806 890 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 WDR47O94967 919 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CD36P16671 472 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 NFKB1P19838 968 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 PRKACGP22612 351 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 FKBP1BP68106 108 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 GALNT2Q10471 571 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CDH17Q12864 832 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 EPS8Q12929 822 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 TYSND1Q2T9J0 566 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 PMF1Q6P1K2 205 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 RETREG3Q86VR2 466 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 GRPEL2Q8TAA5 225 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 HDAC2Q92769 488 aaKnown RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 ZNF641Q96N77 438 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 YME1L1Q96TA2 773 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 FTHL17Q9BXU8 183 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 BEX2Q9BXY8 128 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 KAT8Q9H7Z6 458 aaKnown RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 MYLKQ15746 1914 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 SZT2Q5T011 3432 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 MDM4O15151 490 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 UPK1BO75841 260 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 SLC35E2BP0CK96 405 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CD47Q08722 323 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 KCNAB2Q13303 367 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 NPTX1Q15818 432 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 PSMD5Q16401 504 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 PCSK7Q16549 785 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 SOWAHAQ2M3V2 549 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 ARTNQ5T4W7 220 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 PPP1R26Q5T8A7 1209 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 NCBP2-AS2Q69YL0 99 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 OR6J1Q8NGC5 347 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CNIH3Q8TBE1 160 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 TXNDC15Q96J42 360 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 LTB4R2Q9NPC1 389 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 AKIP1Q9NQ31 210 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 RASSF1Q9NS23 344 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 PAK1IP1Q9NWT1 392 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CMTM6Q9NX76 183 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 PTGDR2Q9Y5Y4 395 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CHD7Q9P2D1 2997 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 LOC110117498-PIK3R3F6TDL0 507 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CD4P01730 458 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 AHSGP02765 367 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 UMPSP11172 480 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 NPY2RP49146 381 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 ZNF404Q494X3 552 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 FBXO48Q5FWF7 155 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 OTUD1Q5VV17 481 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 LCN8Q6JVE9 175 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 TBPL2Q6SJ96 375 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 SLC26A9Q7LBE3 791 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 EFL1Q7Z2Z2 1120 aaKnown RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 SLC22A9Q8IVM8 553 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CLEC4CQ8WTT0 213 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 STON2Q8WXE9 905 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 LGALS12Q96DT0 336 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CNDP2Q96KP4 475 aaKnown RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 OSMRQ99650 979 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 GPR22Q99680 433 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CCDC177Q9NQR7 707 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 MTMR10Q9NXD2 777 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 CDH9Q9ULB4 789 aa9.49□□□□□ -0.89
CCDC40-212ENST00000574799 MRPL42Q9Y6G3 142 aaKnown RBP9.49□□□□□ -0.89
CCDC40-212ENST00000574799 UNC80Q8N2C7 3258 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 PNMA8CA0A1B0GUJ8 204 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 M0QYT0 321 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 DFFAO00273 331 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 PIRO00625 290 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 BCKDKO14874 412 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
CCDC40-212ENST00000574799 AIREO43918 545 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TMCC2O75069 709 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 CPB1P15086 417 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 AZGP1P25311 298 aaKnown RBP9.48□□□□□ -0.89
CCDC40-212ENST00000574799 GRK3P35626 688 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 BEX3Q00994 111 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 NSUN2Q08J23 767 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TPRG1LQ5T0D9 272 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 CCSAPQ6IQ19 270 aaPredicted RBP9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SPRED1Q7Z699 444 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 CLYBLQ8N0X4 340 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 TTC39CQ8N584 583 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 FLCNQ8NFG4 579 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 RASSF5Q8WWW0 418 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SLC30A3Q99726 388 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 SP140LQ9H930 580 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 GOLGA2P5Q9HBQ8 144 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 NMRK2Q9NPI5 230 aa9.48□□□□□ -0.89
CCDC40-212ENST00000574799 COQ3Q9NZJ6 369 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms