RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TYROBPO43914 113 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 CDK14O94921 469 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 ASMTLO95671 621 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 BCKDHBP21953 392 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 ATP1A2P50993 1020 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 CLCN7P51798 805 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 PPP2R2AP63151 447 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 MPP2Q14168 576 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 TMEM207Q6UWW9 146 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 GCNT7Q6ZNI0 430 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 CDHR3Q6ZTQ4 885 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 C1orf210Q8IVY1 113 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 MAML2Q8IZL2 1156 aaPredicted RBP23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 SPATA6LQ8N4H0 392 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 ALKBH8Q96BT7 664 aaKnown RBP23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 CABS1Q96KC9 395 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 APOOQ9BUR5 198 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 ACOT9Q9Y305 439 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 CACNA1IQ9P0X4 2223 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 TMEM120BA0PK00 339 aa23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 AP2A2O94973 939 aa23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 WISP3O95389 354 aaPredicted RBP23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 MYCLP1P12525 358 aaPredicted RBP23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 ZNF8P17098 575 aaPredicted RBP23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 CSTF1Q05048 431 aaKnown RBP23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 PLD6Q8N2A8 252 aaKnown RBP23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 CD200R1Q8TD46 325 aa23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 FOXJ1Q92949 421 aa23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 C12orf65Q9H3J6 166 aaKnown RBP23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 SSU72Q9NP77 194 aaKnown RBP23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 TRMT6Q9UJA5 497 aaKnown RBP23.7■■□□□ 1.39
ATPAF1-213ENST00000574428 PLXND1Q9Y4D7 1925 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 MAP3K13O43283 966 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 RPA3P35244 121 aaPredicted RBP23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 GTF2H3Q13889 308 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 TMEM220Q6QAJ8 160 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 PAQR3Q6TCH7 311 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 NAPRTQ6XQN6 538 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 CENPLQ8N0S6 344 aaPredicted RBP23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 DTWD2Q8NBA8 298 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 TMEM145Q8NBT3 493 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 KCTD4Q8WVF5 259 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 ANKRD49Q8WVL7 239 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 BMFQ96LC9 184 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 UNKQ9C0B0 810 aaKnown RBP23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 POPDC3Q9HBV1 291 aa23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 SMG5Q9UPR3 1016 aaKnown RBP23.7■■□□□ 1.38
ATPAF1-213ENST00000574428 A0A087X1B8 175 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 PRAMEF26H0Y7S4 382 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 PRPF4O43172 522 aaKnown RBP eCLIP23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 VEGFDO43915 354 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 ZNF37AP17032 561 aaPredicted RBP23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 CD9P21926 228 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 CLEC14AQ86T13 490 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 ANKRD42Q8N9B4 389 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 ZNF358Q9NW07 568 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 MKS1Q9NXB0 559 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 DMTF1Q9Y222 760 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 ANKRD6Q9Y2G4 727 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 SLCO1B1Q9Y6L6 691 aa23.69■■□□□ 1.38
ATPAF1-213ENST00000574428 METTL12A8MUP2 240 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CACNB4O00305 520 aaPredicted RBP23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 SHOX2O60902 331 aaPredicted RBP23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CCDC166P0CW27 439 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 DLG1Q12959 904 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 SLC36A4Q6YBV0 504 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 TBC1D1Q86TI0 1168 aaPredicted RBP23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 TRAPPC5Q8IUR0 188 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 FBXL6Q8N531 539 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CADM4Q8NFZ8 388 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 MDM1Q8TC05 714 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 TCP10LQ8TDR4 215 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 PANX3Q96QZ0 392 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 ORAI3Q9BRQ5 295 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 C1QTNF1Q9BXJ1 281 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 PCED1AQ9H1Q7 454 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 SPATS2LQ9NUQ6 558 aaKnown RBP23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 DHRS7Q9Y394 339 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 PCYT1BQ9Y5K3 369 aaPredicted RBP23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 ZDBF2Q9HCK1 2354 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CCDC163A0A0D9SF12 145 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 A0A1W2PPC4 97 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CCR7P32248 378 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CRHR1P34998 444 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 SKIV2L2P42285 1042 aaKnown RBP23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CCT5P48643 541 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 PRLHRP49683 370 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 UGT3A1Q6NUS8 523 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CRTC3Q6UUV7 619 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CPNE9Q8IYJ1 553 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 CAPS2Q9BXY5 557 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 IQCGQ9H095 443 aaKnown RBP23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 EPHX3Q9H6B9 360 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 SLC17A7Q9P2U7 560 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 PRKAB1Q9Y478 270 aa23.68■■□□□ 1.38
ATPAF1-213ENST00000574428 PIKFYVEQ9Y2I7 2098 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 TMEM202A6NGA9 273 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 GLRA3O75311 464 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms