RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 C9orf72Q96LT7 481 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 FCRL5Q96RD9 977 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 HEMGNQ9BXL5 484 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 FSD1LQ9BXM9 530 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 TRIM5Q9C035 493 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 HACD3Q9P035 362 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 RSPH14Q9UHP6 348 aa20.78■□□□□ 0.92
CHRNB1-206ENST00000574054 H7C0C1 242 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 UGT1A9O60656 530 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 RASSF9O75901 435 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 EPOP01588 193 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 ANKRD34CP0C6C1 535 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 PRKAR1AP10644 381 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 BRAFP15056 766 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 UGT1A6P19224 532 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 UGT1A1P22309 533 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 UGT1A4P22310 534 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 ATP5OP48047 213 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 SEPHS1P49903 392 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 SPA17Q15506 151 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 SLC1A5Q15758 541 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 CHRNA6Q15825 494 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 ZDHHC20Q5W0Z9 365 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 TIPARPQ7Z3E1 657 aaKnown RBP20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 TC2NQ8N9U0 490 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 VAT1Q99536 393 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 ZCCHC2Q9C0B9 1178 aaKnown RBP20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 UGT1A7Q9HAW7 530 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 UGT1A10Q9HAW8 530 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 UGT1A8Q9HAW9 530 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 POT1Q9NUX5 634 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 IL17CQ9P0M4 197 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 PKP3Q9Y446 797 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 PCDHA13Q9Y5I0 950 aa20.77■□□□□ 0.92
CHRNB1-206ENST00000574054 LOC101059948A0A1B0GTJ6 334 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 PRR19A6NJB7 356 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 HACD1B0YJ81 288 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 CAPN5O15484 640 aaPredicted RBP20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 GPR39O43194 453 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 PPFIA2O75334 1257 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 C9P02748 559 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 ITGB6P18564 788 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 HLA-DPA1P20036 260 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 LEPRP48357 1165 aaKnown RBP20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 MPP3Q13368 585 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 GPR18Q14330 331 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 LDLRAP1Q5SW96 308 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 AGAP9Q5VTM2 703 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 C11orf63Q6NUN7 778 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 ABRAXAS1Q6UWZ7 409 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 WASH2PQ6VEQ5 465 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 C11orf96Q7Z7L8 435 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 DAAM2Q86T65 1068 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 BRSK1Q8TDC3 778 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 KRT35Q92764 455 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 SPRY4Q9C004 299 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 TRIM4Q9C037 500 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 C10orf88Q9H8K7 445 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 SLC40A1Q9NP59 571 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 WASH6PQ9NQA3 447 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 SIDT1Q9NXL6 827 aaKnown RBP20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 TRHDEQ9UKU6 1024 aa20.76■□□□□ 0.91
CHRNB1-206ENST00000574054 GLYATL1P3A0A0U1RQE8 302 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 MACROD2A1Z1Q3 448 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 NKX2-8O15522 239 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 HALP42357 657 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 CAPZBP47756 277 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 IRGCQ6NXR0 463 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 BBS12Q6ZW61 710 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 AMZ2Q86W34 360 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 RBM12BQ8IXT5 1001 aaKnown RBP20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 RASGEF1AQ8N9B8 481 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 RSC1A1Q92681 617 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 SLC45A3Q96JT2 553 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 FICDQ9BVA6 458 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 ULBP3Q9BZM4 244 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 TRIT1Q9H3H1 467 aaKnown RBP20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 LUC7LQ9NQ29 371 aaKnown RBP20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 GEMIN8Q9NWZ8 242 aaKnown RBP20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 WDR37Q9Y2I8 494 aa20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 TMEM184BQ9Y519 407 aaPredicted RBP20.75■□□□□ 0.91
CHRNB1-206ENST00000574054 POP7O75817 140 aaKnown RBP20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 LCA5LO95447 670 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 RBL1P28749 1068 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 PBLDP30039 288 aaPredicted RBP20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 AKT1P31749 480 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 CYLC1P35663 651 aaPredicted RBP20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 POLE2P56282 527 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 SH3BP2P78314 561 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 ABHD18Q0P651 414 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 ITGA9Q13797 1035 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 GPRC6AQ5T6X5 926 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 CACHD1Q5VU97 1274 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 TMEM220Q6QAJ8 160 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 SARM1Q6SZW1 724 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 FAM92BQ6ZTR7 304 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 CCDC170Q8IYT3 715 aa20.74■□□□□ 0.91
CHRNB1-206ENST00000574054 ZDHHC12Q96GR4 267 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms