RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 BCL7AQ4VC05 210 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 KHDC1Q4VXA5 237 aaKnown RBP12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 CCDC157Q569K6 752 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 FNBP1LQ5T0N5 605 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 KIAA0930Q6ICG6 404 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 MRNIPQ6NTE8 343 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 HIBCHQ6NVY1 386 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 ZNF449Q6P9G9 518 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 OGFOD3Q6PK18 319 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 AMZ2Q86W34 360 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 SLC35F3Q8IY50 421 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 RASGEF1AQ8N9B8 481 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 MFSD3Q96ES6 412 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 SGF29Q96ES7 293 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 STAMBPL1Q96FJ0 436 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 CAAP1Q9H8G2 361 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 PADI4Q9UM07 663 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 KCNK6Q9Y257 313 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 SNX24Q9Y343 169 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 RPS6KL1Q9Y6S9 549 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 IGLV3-16A0A075B6K0 115 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 CPED1A4D0V7 1026 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 OR51F1A6NGY5 319 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 CD3EAPO15446 510 aaKnown RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 POP7O75817 140 aaKnown RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 VAPBO95292 243 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 OR56A5P0C7T3 313 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 GLB1P16278 677 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 PGAM1P18669 254 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 RPL21P46778 160 aaKnown RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 ACADVLP49748 655 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 CDKN1CP49918 316 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 THOC5Q13769 683 aaKnown RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 DBN1Q16643 649 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 C14orf28Q4W4Y0 310 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 RNF187Q5TA31 235 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 PACS1Q6VY07 963 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 DET1Q7L5Y6 550 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 TMEM135Q86UB9 458 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 LMNTD2Q8IXW0 634 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 PIANPQ8IYJ0 282 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 BEND7Q8N7W2 519 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 KYQ8NBH2 561 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 GPR156Q8NFN8 814 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 WDR48Q8TAF3 677 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 IFI44Q8TCB0 444 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 MAPK15Q8TD08 544 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 CALML6Q8TD86 181 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 ZNF669Q96BR6 464 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 SIGLEC10Q96LC7 697 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 LINC00615Q96LM1 132 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 TSSK1BQ9BXA7 367 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 ABCG4Q9H172 646 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 DPH5Q9H2P9 285 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 SPATS2LQ9NUQ6 558 aaKnown RBP12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 VPS9D1Q9Y2B5 631 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 DNAJC16Q9Y2G8 782 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 PLEKHM1Q9Y4G2 1056 aa12.57□□□□□ -0.4
TRAPPC1-206ENST00000573989 KIR2DS5A0A0G2JLQ3 304 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 A0A0G2JNG1 304 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 MGAT4DA6NG13 374 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 PDZK1P1A8MUH7 402 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 KIR2DS3K7RE56 304 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 NUDT21O43809 227 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 NOBOXO60393 691 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 SNX2O60749 519 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 NDUFS3O75489 264 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 FTH1P02794 183 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 F3P13726 295 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 PNLIPP16233 465 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 CA5AP35218 305 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 HALP42357 657 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 PRLHRP49683 370 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 CTSCP53634 463 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 DHX9Q08211 1270 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 DMPKQ09013 629 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 KIR2DS5Q14953 304 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 LONRF1Q17RB8 773 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 BBS9Q3SYG4 887 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 ANKRD20A4Q4UJ75 823 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 GLE1Q53GS7 698 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 N4BP2L1Q5TBK1 243 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 DUPD1Q68J44 220 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 CES3Q6UWW8 571 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 EFL1Q7Z2Z2 1120 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 C11orf96Q7Z7L8 435 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 ZNF547Q8IVP9 402 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 MMGT1Q8N4V1 131 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 OR2L2Q8NH16 312 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 ADAMTS14Q8WXS8 1223 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 TCF12Q99081 682 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 EBNA1BP2Q99848 306 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 ACSL5Q9ULC5 683 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 PCYT1BQ9Y5K3 369 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 ST14Q9Y5Y6 855 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 RP1P56715 2156 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 DCHS1Q96JQ0 3298 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms