RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 DENND6AQ8IWF6 608 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 RBFAQ8N0V3 343 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 GABPB2Q8TAK5 448 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 SCG3Q8WXD2 468 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 ZNF514Q96K75 400 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 OR2M4Q96R27 311 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 MRPL40Q9NQ50 206 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 TRNAU1APQ9NX07 287 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 ZDHHC3Q9NYG2 299 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 ATXN10Q9UBB4 475 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 ZNHIT2Q9UHR6 403 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 KLF15Q9UIH9 416 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 RABGEF1Q9UJ41 708 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 ARID1BQ8NFD5 2236 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 TMEM131Q92545 1883 aa12.74□□□□□ -0.37
NPLOC4-214ENST00000573876 CXorf49A8MYA2 514 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 F8W8V4 182 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 FLRT2O43155 660 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 AQP9O43315 295 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 GRID2O43424 1007 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 NUAK1O60285 661 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 OR1I1O60431 355 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 HAUS5O94927 633 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 S1PR4O95977 384 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 F7P08709 466 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 ZNF8P17098 575 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 ACRV1P26436 265 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 STX2P32856 288 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 GRK6P43250 576 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 TTPAP49638 278 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 ILF3Q12906 894 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■□□□□ 10.2
NPLOC4-214ENST00000573876 C1orf61Q13536 156 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 ITIH4Q14624 930 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 SHBQ15464 509 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 DBN1Q16643 649 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 KBTBD12Q3ZCT8 623 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 KHDC1Q4VXA5 237 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 ZNF470Q6ECI4 717 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 LRRTM4Q86VH4 590 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 GKN2Q86XP6 184 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 GATAD2AQ86YP4 633 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 CILP2Q8IUL8 1156 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 TRAPPC5Q8IUR0 188 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 CTAGE3PQ8IX95 158 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 LMNTD2Q8IXW0 634 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 SDR16C5Q8N3Y7 309 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 ZNF548Q8NEK5 533 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 SAP25Q8TEE9 199 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 SETD7Q8WTS6 366 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 CDKL2Q92772 493 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 CAVIN3Q969G5 261 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 MRRFQ96E11 262 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 SCARF2Q96GP6 870 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 TCF12Q99081 682 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 FAM167BQ9BTA0 163 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 LRRC61Q9BV99 259 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 GSDMCQ9BYG8 508 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 TCEAL2Q9H3H9 227 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 FBXO6Q9NRD1 293 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 SMYD2Q9NRG4 433 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 ZFATQ9P243 1243 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 FBXO5Q9UKT4 447 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 CSNK1G3Q9Y6M4 447 aa12.73□□□□□ -0.37
NPLOC4-214ENST00000573876 A0A087WUV0 522 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 CCDC151A5D8V7 595 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 PCNX2A6NKB5 2137 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 FAM159BA6NKW6 160 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 SCAMP1O15126 338 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 KMOO15229 486 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 AHSGP02765 367 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 FUCA1P04066 466 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 ANXA6P08133 673 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 ATP1B2P14415 290 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 ZNF7P17097 686 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 VCLP18206 1134 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 HSD17B3P37058 310 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 LRP8Q14114 963 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 PYCR3Q53H96 274 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 ZNF789Q5FWF6 425 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 TMEM220Q6QAJ8 160 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 DET1Q7L5Y6 550 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 TAF8Q7Z7C8 310 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 PPM1NQ8N819 430 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 C2CD4AQ8NCU7 369 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 NAT14Q8WUY8 206 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 SGF29Q96ES7 293 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 CYTH2Q99418 400 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 DUSP23Q9BVJ7 150 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 BOCQ9BWV1 1114 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 TMEM168Q9H0V1 697 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 SLC17A6Q9P2U8 582 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 PNMA8BQ9ULN7 279 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 CRYL1Q9Y2S2 319 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 CFAP54Q96N23 3096 aa12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 ZNF106Q9H2Y7 1883 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-214ENST00000573876 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.37
NPLOC4-214ENST00000573876 SPTBN2O15020 2390 aa12.71□□□□□ -0.37
NPLOC4-214ENST00000573876 UBA6A0AVT1 1052 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-214ENST00000573876 LMO7DNF2Z398 122 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms