RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 C12orf65Q9H3J6 166 aaKnown RBP10□□□□□ -0.81
SMG6-213ENST00000573166 FBRSQ9HAH7 460 aa10□□□□□ -0.81
SMG6-213ENST00000573166 RC3H2Q9HBD1 1191 aaKnown RBP10□□□□□ -0.81
SMG6-213ENST00000573166 NDE1Q9NXR1 346 aa10□□□□□ -0.81
SMG6-213ENST00000573166 IL37Q9NZH6 218 aa10□□□□□ -0.81
SMG6-213ENST00000573166 PNMA8BQ9ULN7 279 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 NUP205Q92621 2012 aa10□□□□□ -0.81
SMG6-213ENST00000573166 CAPN8A6NHC0 703 aa10□□□□□ -0.81
SMG6-213ENST00000573166 UBDO15205 165 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ULK1O75385 1050 aa10□□□□□ -0.81
SMG6-213ENST00000573166 STK16O75716 305 aa10□□□□□ -0.81
SMG6-213ENST00000573166 CHRM1P11229 460 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 ARRB1P49407 418 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 SH3BGRP55822 239 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 GPX6P59796 221 aa10□□□□□ -0.81
SMG6-213ENST00000573166 SATB1Q01826 763 aa10□□□□□ -0.81
SMG6-213ENST00000573166 LIPMQ5VYY2 423 aa10□□□□□ -0.81
SMG6-213ENST00000573166 TSPAN33Q86UF1 283 aa10□□□□□ -0.81
SMG6-213ENST00000573166 NXPE1Q8N323 547 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ISG20Q96AZ6 181 aaKnown RBP10□□□□□ -0.81
SMG6-213ENST00000573166 ELSPBP1Q96BH3 223 aa10□□□□□ -0.81
SMG6-213ENST00000573166 RTP4Q96DX8 246 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ZNF778Q96MU6 729 aa10□□□□□ -0.81
SMG6-213ENST00000573166 GTPBP2Q9BX10 602 aaKnown RBP10□□□□□ -0.81
SMG6-213ENST00000573166 TRIT1Q9H3H1 467 aaKnown RBP10□□□□□ -0.81
SMG6-213ENST00000573166 MIEF1Q9NQG6 463 aa10□□□□□ -0.81
SMG6-213ENST00000573166 NLE1Q9NVX2 485 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 POLG2Q9UHN1 485 aa10□□□□□ -0.81
SMG6-213ENST00000573166 PRKAB1Q9Y478 270 aa10□□□□□ -0.81
SMG6-213ENST00000573166 RHPN2P1A8MT19 583 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 OTCP00480 354 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 HMGCLP35914 325 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SERPINB5P36952 375 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 RGRP47804 291 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 STC1P52823 247 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 CNTN1Q12860 1018 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 ADAM15Q13444 863 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 EML3Q32P44 896 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 HEATR4Q86WZ0 1026 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 RDH11Q8TC12 318 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
SMG6-213ENST00000573166 GDF15Q99988 308 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 CAPN10Q9HC96 672 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 ITM2BQ9Y287 266 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 PLLPQ9Y342 182 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 RLFQ13129 1914 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 KNTC1P50748 2209 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 C5orf67F2Z3F1 127 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 IGHA2P01877 340 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 C6P13671 934 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 CRHR1P34998 444 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 CPA2P48052 419 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 CXCL12P48061 93 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 RPL14P50914 215 aaKnown RBP9.99□□□□□ -0.81
SMG6-213ENST00000573166 CLCNKAP51800 687 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SEMA3BQ13214 749 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 NFATC2Q13469 925 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SCIMPQ6UWF3 145 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 GPRIN3Q6ZVF9 776 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 WFDC5Q8TCV5 224 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 HHIPQ96QV1 700 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 TMEM120AQ9BXJ8 343 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SLC2A4RGQ9NR83 387 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SH3BP4Q9P0V3 963 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 VTI1BQ9UEU0 232 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SNX6Q9UNH7 406 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 KCNK6Q9Y257 313 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 NCOR1O75376 2440 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 FAM159BA6NKW6 160 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 ECI2O75521 394 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SEMA4FO95754 770 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 RPL10P27635 214 aaKnown RBP9.99□□□□□ -0.81
SMG6-213ENST00000573166 CCR3P51677 355 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 TMEM115Q12893 351 aaPredicted RBP9.99□□□□□ -0.81
SMG6-213ENST00000573166 TRPM8Q7Z2W7 1104 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 ZC3HC1Q86WB0 502 aaKnown RBP9.99□□□□□ -0.81
SMG6-213ENST00000573166 TDRPQ86YL5 185 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 CILP2Q8IUL8 1156 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 CEP70Q8NHQ1 597 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SLC38A3Q99624 504 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 TMEM109Q9BVC6 243 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 TK2O00142 265 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 GRID2O43424 1007 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 ALPPL2P10696 532 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SOX11P35716 441 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 SKP1P63208 163 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 IL1RL1Q01638 556 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 PIWIL2Q8TC59 973 aaKnown RBP9.99□□□□□ -0.81
SMG6-213ENST00000573166 CKAP2Q8WWK9 683 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 PIGKQ92643 395 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 GLYATL1Q969I3 302 aa9.99□□□□□ -0.81
SMG6-213ENST00000573166 MRPL40Q9NQ50 206 aaKnown RBP9.99□□□□□ -0.81
SMG6-213ENST00000573166 IGLV3-10A0A075B6K4 115 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 EVPLLA8MZ36 301 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 H0Y858 1186 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 RGS14O43566 566 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 ZNF217O75362 1048 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 IPO13O94829 963 aaKnown RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 TNFP01375 233 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 IFNA8P32881 189 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms