RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 PDX1P52945 283 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 DRG2P55039 364 aaKnown RBP20.33■□□□□ 0.85
CHMP6-204ENST00000572778 SESN2P58004 480 aaPredicted RBP20.33■□□□□ 0.85
CHMP6-204ENST00000572778 GABREP78334 506 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 GPS1Q13098 491 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 CYP1B1Q16678 543 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 MAP9Q49MG5 647 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 C3orf38Q5JPI3 329 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.33■□□□□ 0.85
CHMP6-204ENST00000572778 FOXR1Q6PIV2 292 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 PIM3Q86V86 326 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 SERPINA9Q86WD7 417 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 PROSER1Q86XN7 944 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 SH3KBP1Q96B97 665 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 TMEM74Q96NL1 305 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 RANBP9Q96S59 729 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 EPB41L5Q9HCM4 733 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 SARS2Q9NP81 518 aaKnown RBP20.33■□□□□ 0.85
CHMP6-204ENST00000572778 ZDHHC3Q9NYG2 299 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 SCHIP1Q9P0W5 487 aaPredicted RBP20.33■□□□□ 0.85
CHMP6-204ENST00000572778 CPNE7Q9UBL6 633 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 DKK4Q9UBT3 224 aa20.33■□□□□ 0.85
CHMP6-204ENST00000572778 GOLGA6L10A0A0M3HER8 536 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 TAF4O00268 1085 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 BRINP1O60477 761 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 CPNE6O95741 557 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 CD1CP29017 333 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 CACNG1Q06432 222 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 TSTD2Q5T7W7 516 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 NKAIN2Q5VXU1 208 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 TRIM48Q8IWZ4 208 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 PPHLN1Q8NEY8 458 aaKnown RBP20.32■□□□□ 0.84
CHMP6-204ENST00000572778 HEXDCQ8WVB3 486 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 CCDC97Q96F63 343 aaPredicted RBP20.32■□□□□ 0.84
CHMP6-204ENST00000572778 AHCYL2Q96HN2 611 aaKnown RBP20.32■□□□□ 0.84
CHMP6-204ENST00000572778 STRADBQ9C0K7 418 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 ZMYND15Q9H091 742 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 POLR1BQ9H9Y6 1135 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 FAM8A1Q9UBU6 413 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 SLC2A6Q9UGQ3 507 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 SATB2Q9UPW6 733 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 TCAF1Q9Y4C2 921 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 FRYQ5TBA9 3013 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 ASXL3Q9C0F0 2248 aa20.32■□□□□ 0.84
CHMP6-204ENST00000572778 IGHV1OR21-1A0A087WYE8 117 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 TRBV5-4A0A0C4DH59 114 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 CCDC162PA2VCL2 907 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 OR51F1A6NGY5 319 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 PRR19A6NJB7 356 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 TMX2-CTNND1H3BSU7 103 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 AP3B1O00203 1094 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 PHF2O75151 1096 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 VIPP01282 170 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 ACRV1P26436 265 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 LSSP48449 732 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 DMPKQ09013 629 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 ABRAXAS1Q6UWZ7 409 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 TMPRSS9Q7Z410 1059 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 AVL9Q8NBF6 648 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 HDAC10Q969S8 669 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 ZNF778Q96MU6 729 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 NAPGQ99747 312 aaPredicted RBP20.31■□□□□ 0.84
CHMP6-204ENST00000572778 NUDT22Q9BRQ3 303 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 BFARQ9NZS9 450 aa20.31■□□□□ 0.84
CHMP6-204ENST00000572778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.31■□□□□ 0.84
CHMP6-204ENST00000572778 CCDC187A0A096LP49 1063 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 TCRBV7S3A2A0A539 114 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 AGRPO00253 132 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 ATP1B2P14415 290 aaPredicted RBP20.3■□□□□ 0.84
CHMP6-204ENST00000572778 BRAFP15056 766 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 XRCC1P18887 633 aaPredicted RBP20.3■□□□□ 0.84
CHMP6-204ENST00000572778 TPSB2P20231 275 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 PSMA3P25788 255 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 SLC19A1P41440 591 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 HALP42357 657 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 NPY2RP49146 381 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 GPLD1P80108 840 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 CDK16Q00536 496 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 NFE2L1Q14494 772 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 TPSAB1Q15661 275 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 BCL7AQ4VC05 210 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 PCID2Q5JVF3 399 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 PHF19Q5T6S3 580 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 AGAP9Q5VTM2 703 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 WASH2PQ6VEQ5 465 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 FAM83HQ6ZRV2 1179 aaPredicted RBP20.3■□□□□ 0.84
CHMP6-204ENST00000572778 NLRP9Q7RTR0 991 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 PIANPQ8IYJ0 282 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 LSMEM2Q8N112 164 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 OR13J1Q8NGT2 312 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 OR6P1Q8NGX9 317 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 OR10G6Q8NH81 332 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 WDR36Q8NI36 951 aaKnown RBP20.3■□□□□ 0.84
CHMP6-204ENST00000572778 CAPZA3Q96KX2 299 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.3■□□□□ 0.84
CHMP6-204ENST00000572778 SEMA6CQ9H3T2 930 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 WASH6PQ9NQA3 447 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 CHRAC1Q9NRG0 131 aa20.3■□□□□ 0.84
CHMP6-204ENST00000572778 ZNF624Q9P2J8 865 aaPredicted RBP20.3■□□□□ 0.84
CHMP6-204ENST00000572778 RIMKLBQ9ULI2 386 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms