RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TAB3Q8N5C8 712 aaPredicted RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 FAM46DQ8NEK8 389 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ZDHHC1Q8WTX9 485 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ZCCHC14Q8WYQ9 949 aaKnown RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 TIMM29Q9BSF4 260 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 GSDMCQ9BYG8 508 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 SUDS3Q9H7L9 328 aaPredicted RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 LRRC40Q9H9A6 602 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 RMI1Q9H9A7 625 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 TRIM39Q9HCM9 518 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 EIF2B3Q9NR50 452 aaKnown RBP8.56□□□□□ -1.04
SMG6-210ENST00000572205 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMG6-210ENST00000572205 OGFRQ9NZT2 677 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 KCNK6Q9Y257 313 aa8.56□□□□□ -1.04
SMG6-210ENST00000572205 ATRXP46100 2492 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 PRAMEF33A0A0G2JMD5 474 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 SRRM3A6NNA2 597 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 ZNF185O15231 689 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 TP73O15350 636 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 GRID2O43424 1007 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 VEGFDO43915 354 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 PPFIA2O75334 1257 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 SRP72O76094 671 aaKnown RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 SLC25A14O95258 325 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 TPH1P17752 444 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 LPOP22079 712 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 ARNTP27540 789 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 CCKBRP32239 447 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 CETN2P41208 172 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 DUSP3P51452 185 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 EMP3P54852 163 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 CCL7P80098 99 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 E2F1Q01094 437 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 SEMA3AQ14563 771 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 KCNJ11Q14654 390 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 ST3GAL2Q16842 350 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 PLA2G4EQ3MJ16 856 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 ANKRD22Q5VYY1 191 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 IYDQ6PHW0 289 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 CRTC3Q6UUV7 619 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 CCNJLQ8IV13 435 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 NXPE1Q8N323 547 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 LILRA3Q8N6C8 439 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 OR52K1Q8NGK4 314 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 GPR150Q8NGU9 434 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 MAPK15Q8TD08 544 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 MARVELD3Q96A59 401 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 ATXN7L3BQ96GX2 97 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 LIN37Q96GY3 246 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 RANBP9Q96S59 729 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 OSBPL9Q96SU4 736 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 NUDT22Q9BRQ3 303 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 NRSN2Q9GZP1 204 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 TWSG1Q9GZX9 223 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 RAD18Q9NS91 495 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 KCND1Q9NSA2 647 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 NLE1Q9NVX2 485 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 TMEM9Q9P0T7 183 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 ZNF624Q9P2J8 865 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 SLC2A6Q9UGQ3 507 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 FEZ2Q9UHY8 353 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 ATXN7L1Q9ULK2 861 aaPredicted RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 SNX12Q9UMY4 172 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 DRG1Q9Y295 367 aaKnown RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 WDR37Q9Y2I8 494 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 JRKLQ9Y4A0 524 aa8.55□□□□□ -1.04
SMG6-210ENST00000572205 URB1O60287 2271 aaKnown RBP8.55□□□□□ -1.04
SMG6-210ENST00000572205 IGHV1OR21-1A0A087WYE8 117 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 OR51F1A6NGY5 319 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 ERI2A8K979 691 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 CDRT15L2A8MXV6 281 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 CES2O00748 559 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 CEP104O60308 925 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 BRINP1O60477 761 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 STK10O94804 968 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 RPLP0P05388 317 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 F3P13726 295 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 ZNF7P17097 686 aaPredicted RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 CD1CP29017 333 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 STIP1P31948 543 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 FDFT1P37268 417 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 MAGEA3P43357 314 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 PRLHRP49683 370 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 CYP4F3Q08477 520 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 TMEM115Q12893 351 aaPredicted RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 SQSTM1Q13501 440 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 POU6F1Q14863 301 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 C16orf72Q14CZ0 275 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 DBN1Q16643 649 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 BCL7AQ4VC05 210 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 CCDC38Q502W7 563 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 AGAP9Q5VTM2 703 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 ZDHHC20Q5W0Z9 365 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 RBM44Q6ZP01 1051 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 CHST15Q7LFX5 561 aaPredicted RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 LRRTM4Q86VH4 590 aa8.54□□□□□ -1.04
SMG6-210ENST00000572205 ZNF761Q86XN6 746 aaPredicted RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 BEND7Q8N7W2 519 aaPredicted RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 SNIP1Q8TAD8 396 aaKnown RBP8.54□□□□□ -1.04
SMG6-210ENST00000572205 ACTRT1Q8TDG2 376 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms