RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 INTS10Q9NVR2 710 aaKnown RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 KLHL20Q9Y2M5 609 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 SIPA1L1O43166 1804 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 GABRDO14764 452 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 NDUFS2O75306 463 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 RSL1D1O76021 490 aaKnown RBP11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 ECT2LQ008S8 904 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 TAF10Q12962 218 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 CCDC80Q76M96 950 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 RBFAQ8N0V3 343 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 ATAD1Q8NBU5 361 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 BRSK1Q8TDC3 778 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 TMEM174Q8WUU8 243 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 UROC1Q96N76 676 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 C2orf49Q9BVC5 232 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 ZNF696Q9H7X3 374 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 GMIPQ9P107 970 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 CACNG4Q9UBN1 327 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 GIMAP2Q9UG22 337 aa11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 CDV3Q9UKY7 258 aaKnown RBP11.02□□□□□ -0.64
PCDHGA4-201ENST00000571252 GREB1LQ9C091 1923 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 CARNS1A5YM72 827 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 SCELO95171 688 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 HOXB6P17509 224 aaKnown RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 DNAJB1P25685 340 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 TUFMP49411 452 aaKnown RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 ERVK-8P63133 956 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 ARHGAP1Q07960 439 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 RFTN1Q14699 578 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 CTC1Q2NKJ3 1217 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 HECTD3Q5T447 861 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 DENND5AQ6IQ26 1287 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 LUZP2Q86TE4 346 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 FBXL20Q96IG2 436 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 APOLD1Q96LR9 279 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 FEM1AQ9BSK4 669 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 YTHDF1Q9BYJ9 559 aaKnown RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 GIN1Q9NXP7 522 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 PDP1Q9P0J1 537 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 CRNNQ9UBG3 495 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 IDH3BO43837 385 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 TSC22D2O75157 780 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 SERPINA4P29622 427 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 FAM174BQ3ZCQ3 159 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 RABL3Q5HYI8 236 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 NAPRTQ6XQN6 538 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 AHSA2Q719I0 299 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 CTU1Q7Z7A3 348 aaKnown RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 PIM3Q86V86 326 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 OR13C4Q8NGS5 318 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 KCTD13Q8WZ19 329 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 TRIM63Q969Q1 353 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 HAPLN3Q96S86 360 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 SMAD5Q99717 465 aaKnown RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 TFB2MQ9H5Q4 396 aaKnown RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 RAPGEFL1Q9UHV5 662 aa11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 MYH9P35579 1960 aaKnown RBP11.02□□□□□ -0.65
PCDHGA4-201ENST00000571252 FAM234BA2RU67 622 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PRR23D1E9PI22 279 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PGK1P00558 417 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 CATP04040 527 aaKnown RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PRR23D2P0DMB1 279 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 AQP1P29972 269 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 IL12RB1P42701 662 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PPP1R8Q12972 351 aaKnown RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 ZNF829Q3KNS6 432 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 CEP78Q5JTW2 689 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 RGMBQ6NW40 437 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 HID1Q8IV36 788 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PAWRQ96IZ0 340 aaKnown RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 DNAJB9Q9UBS3 223 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 ASB3Q9Y575 518 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PCDHGC4Q9Y5F7 938 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 IFRD1O00458 451 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 MYL12AP19105 171 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 OGNP20774 298 aaKnown RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 CES1P23141 567 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PAX3P23760 479 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 SLC26A3P40879 764 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 KIR3DL1P43629 444 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 NDST2P52849 883 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 FKBP1BP68106 108 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 SULT2A1Q06520 285 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 MED22Q15528 200 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 AKAP14Q86UN6 197 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 CIR1Q86X95 450 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 ZNF513Q8N8E2 541 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 SLC13A3Q8WWT9 602 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PHF21AQ96BD5 680 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 ZNF778Q96MU6 729 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 OSBPL2Q9H1P3 480 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 TRMT13Q9NUP7 481 aaKnown RBP11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 RBPJLQ9UBG7 517 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 A0A1B0GVG6 124 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 SUV39H1O43463 412 aa11.01□□□□□ -0.65
PCDHGA4-201ENST00000571252 PENKP01210 267 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms