RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 LRRC4CQ9HCJ2 640 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 CYP4F12Q9HCS2 524 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 VPS18Q9P253 973 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 GPSM3Q9Y4H4 160 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 SLCO1B1Q9Y6L6 691 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 TMEM202A6NGA9 273 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 AGAP14A8MT82 685 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 CER1O95813 267 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 OR56A5P0C7T3 313 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 POLD2P49005 469 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 HNRNPKP61978 463 aaKnown RBP eCLIP15.83■□□□□ 0.12
USB1-215ENST00000569252 ILF2Q12905 390 aaKnown RBP15.83■□□□□ 0.12
USB1-215ENST00000569252 SMAD1Q15797 465 aaKnown RBP15.83■□□□□ 0.12
USB1-215ENST00000569252 ZNF449Q6P9G9 518 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 ADGRG6Q86SQ4 1221 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 CILP2Q8IUL8 1156 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 CTAGE3PQ8IX95 158 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 PIANPQ8IYJ0 282 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 TSACCQ96A04 125 aaPredicted RBP15.83■□□□□ 0.12
USB1-215ENST00000569252 CCDC77Q9BR77 488 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 CDC42EP4Q9H3Q1 356 aaKnown RBP15.83■□□□□ 0.12
USB1-215ENST00000569252 CARS2Q9HA77 564 aaKnown RBP15.83■□□□□ 0.12
USB1-215ENST00000569252 INTS10Q9NVR2 710 aaKnown RBP15.83■□□□□ 0.12
USB1-215ENST00000569252 IL1RAPL1Q9NZN1 696 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 ATXN10Q9UBB4 475 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 SLC17A4Q9Y2C5 497 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 SNX11Q9Y5W9 270 aa15.83■□□□□ 0.12
USB1-215ENST00000569252 APC2O95996 2303 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 TRBV5-4A0A0C4DH59 114 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 UBA6A0AVT1 1052 aaPredicted RBP15.82■□□□□ 0.12
USB1-215ENST00000569252 PRSS38A1L453 326 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 KMOO15229 486 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 YKT6O15498 198 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 GPR39O43194 453 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 GRID2O43424 1007 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 NUAK1O60285 661 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 MTX2O75431 263 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 AP2A2O94973 939 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 ACSL3O95573 720 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 CEACAM5P06731 702 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 IVLP07476 585 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 FAM153BP0C7A2 387 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 PRSS56P0CW18 603 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 JUNDP17535 347 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 VCLP18206 1134 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 CTSKP43235 329 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 GNPDA1P46926 289 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 GRIK2Q13002 908 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 FZD2Q14332 565 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 DBN1Q16643 649 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 HLA-BQ31612 363 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 FAM153CQ494X1 144 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 ZNF648Q5T619 568 aaPredicted RBP15.82■□□□□ 0.12
USB1-215ENST00000569252 PTRHD1Q6GMV3 140 aaKnown RBP15.82■□□□□ 0.12
USB1-215ENST00000569252 EMBQ6PCB8 327 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 TMEM220Q6QAJ8 160 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 KDM7AQ6ZMT4 941 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 KIAA0408Q6ZU52 694 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 DET1Q7L5Y6 550 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 LRRTM4Q86VH4 590 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 LRRC6Q86X45 466 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 TRAPPC5Q8IUR0 188 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 GSPT2Q8IYD1 628 aaKnown RBP15.82■□□□□ 0.12
USB1-215ENST00000569252 SLC22A18ASQ8N1D0 253 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 MINDY1Q8N5J2 469 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 UBLCP1Q8WVY7 318 aaPredicted RBP15.82■□□□□ 0.12
USB1-215ENST00000569252 CAPN10Q9HC96 672 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 MOCS1Q9NZB8 636 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 NINJ2Q9NZG7 142 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 FBXO5Q9UKT4 447 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 SUFUQ9UMX1 484 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 GPR34Q9UPC5 381 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 DOLKQ9UPQ8 538 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 IKBKGQ9Y6K9 419 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 IGSF10Q6WRI0 2623 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 BPTFQ12830 3046 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 LRRK1Q38SD2 2015 aa15.82■□□□□ 0.12
USB1-215ENST00000569252 A0A087WUV0 522 aaPredicted RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 TCRBV9S1A1TA0A576 114 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 H3BMM5 538 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 PRMT5O14744 637 aaPredicted RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 CSF2P04141 144 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 CD59P13987 128 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 ZNF8P17098 575 aaPredicted RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 ARNTP27540 789 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 HK3P52790 923 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 ADAMTS20P59510 1910 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 CTBP1Q13363 440 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 SUZ12Q15022 739 aaKnown RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 ZNF542PQ5EBM4 170 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 TEDDM1Q5T9Z0 273 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 LDB1Q86U70 411 aaPredicted RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 SLC26A11Q86WA9 606 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 SPATS2Q86XZ4 545 aaKnown RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 UNC5BQ8IZJ1 945 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 FBF1Q8TES7 1133 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 SGF29Q96ES7 293 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 CYTH2Q99418 400 aa15.81■□□□□ 0.12
USB1-215ENST00000569252 ELF4Q99607 663 aaPredicted RBP15.81■□□□□ 0.12
USB1-215ENST00000569252 WDR83Q9BRX9 315 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms