RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 GDAP1Q8TB36 358 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 SNRNP27Q8WVK2 155 aaKnown RBP28.92■■■□□ 2.22
RAB40C-211ENST00000568586 TTC25Q96NG3 672 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 TMEM121Q9BTD3 319 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 OSGEPL1Q9H4B0 414 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 ZNF624Q9P2J8 865 aaPredicted RBP28.92■■■□□ 2.22
RAB40C-211ENST00000568586 KCTD3Q9Y597 815 aa28.92■■■□□ 2.22
RAB40C-211ENST00000568586 PRAMEF1O95521 474 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 BRAFP15056 766 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 STIP1P31948 543 aaKnown RBP28.91■■■□□ 2.22
RAB40C-211ENST00000568586 ZNF140P52738 457 aaPredicted RBP28.91■■■□□ 2.22
RAB40C-211ENST00000568586 CLN3Q13286 438 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 NFATC2Q13469 925 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 P3H1Q32P28 736 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 MEI1Q5TIA1 1274 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 BROXQ5VW32 411 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 TRAPPC5Q8IUR0 188 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 LRRC8AQ8IWT6 810 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 LRRC45Q96CN5 670 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 TMEM9Q9P0T7 183 aa28.91■■■□□ 2.22
RAB40C-211ENST00000568586 ZNF106Q9H2Y7 1883 aaKnown RBP28.91■■■□□ 2.22
RAB40C-211ENST00000568586 LDB2O43679 373 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 SRP72O76094 671 aaKnown RBP28.9■■■□□ 2.22
RAB40C-211ENST00000568586 VCLP18206 1134 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 IDSP22304 550 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 SLC19A1P41440 591 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 CTSCP53634 463 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 SPARCL1Q14515 664 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 OASLQ15646 514 aaKnown RBP28.9■■■□□ 2.22
RAB40C-211ENST00000568586 PLA2G4EQ3MJ16 856 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 SLC13A5Q86YT5 568 aaPredicted RBP28.9■■■□□ 2.22
RAB40C-211ENST00000568586 RCBTB1Q8NDN9 531 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 ZNF514Q96K75 400 aaPredicted RBP28.9■■■□□ 2.22
RAB40C-211ENST00000568586 FCRL3Q96P31 734 aaPredicted RBP28.9■■■□□ 2.22
RAB40C-211ENST00000568586 LRRC40Q9H9A6 602 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 DNAJC16Q9Y2G8 782 aa28.9■■■□□ 2.22
RAB40C-211ENST00000568586 TMPRSS3P57727 454 aa28.89■■■□□ 2.22
RAB40C-211ENST00000568586 SOWAHCQ53LP3 525 aaPredicted RBP28.89■■■□□ 2.22
RAB40C-211ENST00000568586 SEL1L2Q5TEA6 688 aa28.89■■■□□ 2.22
RAB40C-211ENST00000568586 ARHGAP22Q7Z5H3 698 aa28.89■■■□□ 2.22
RAB40C-211ENST00000568586 AMZ2Q86W34 360 aa28.89■■■□□ 2.22
RAB40C-211ENST00000568586 AGBL5Q8NDL9 886 aa28.89■■■□□ 2.22
RAB40C-211ENST00000568586 AHCYL2Q96HN2 611 aaKnown RBP28.89■■■□□ 2.22
RAB40C-211ENST00000568586 FKBPLQ9UIM3 349 aa28.89■■■□□ 2.22
RAB40C-211ENST00000568586 PCDHGA3Q9Y5H0 932 aa28.89■■■□□ 2.22
RAB40C-211ENST00000568586 C9orf172C9J069 976 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 PSMD3O43242 534 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 LIASO43766 372 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 POP7O75817 140 aaKnown RBP28.88■■■□□ 2.21
RAB40C-211ENST00000568586 AP2A1O95782 977 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 CCDC175P0C221 793 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 CCL4P13236 92 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 HADHAP40939 763 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 TMEM220Q6QAJ8 160 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 TMEM26Q6ZUK4 368 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 GPR155Q7Z3F1 870 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 JAMLQ86YT9 394 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 ATG4AQ8WYN0 398 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 USP7Q93009 1102 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 ASB8Q9H765 288 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 POT1Q9NUX5 634 aa28.88■■■□□ 2.21
RAB40C-211ENST00000568586 PRAMEF33A0A0G2JMD5 474 aa28.87■■■□□ 2.21
RAB40C-211ENST00000568586 IQCJ-SCHIP1C9J366 451 aaPredicted RBP28.87■■■□□ 2.21
RAB40C-211ENST00000568586 PRAMEF10O60809 474 aa28.87■■■□□ 2.21
RAB40C-211ENST00000568586 FGF3P11487 239 aaPredicted RBP28.87■■■□□ 2.21
RAB40C-211ENST00000568586 PSMA3P25788 255 aa28.87■■■□□ 2.21
RAB40C-211ENST00000568586 CD82P27701 267 aa28.87■■■□□ 2.21
RAB40C-211ENST00000568586 RPS6KA1Q15418 735 aa28.87■■■□□ 2.21
RAB40C-211ENST00000568586 LONRF2Q1L5Z9 754 aa28.87■■■□□ 2.21
RAB40C-211ENST00000568586 RBM12BQ8IXT5 1001 aaKnown RBP28.87■■■□□ 2.21
RAB40C-211ENST00000568586 OR13C4Q8NGS5 318 aa28.87■■■□□ 2.21
RAB40C-211ENST00000568586 SLC40A1Q9NP59 571 aa28.87■■■□□ 2.21
RAB40C-211ENST00000568586 TEX51A0A1B0GUA7 166 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 KLHL33A6NCF5 533 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 PDZK1P1A8MUH7 402 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 B4E171 279 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 H7C0S8 307 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 VIPP01282 170 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 MPSTP25325 297 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 RPL10P27635 214 aaKnown RBP28.86■■■□□ 2.21
RAB40C-211ENST00000568586 TSPAN7P41732 249 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 CCZ1BP86790 482 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 CCZ1P86791 482 aaPredicted RBP28.86■■■□□ 2.21
RAB40C-211ENST00000568586 TAAR9Q96RI9 348 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 UBL7Q96S82 380 aaPredicted RBP28.86■■■□□ 2.21
RAB40C-211ENST00000568586 TBC1D10AQ9BXI6 508 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 WDR37Q9Y2I8 494 aa28.86■■■□□ 2.21
RAB40C-211ENST00000568586 KALRNO60229 2985 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 ATMQ13315 3056 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 ERI2A8K979 691 aaKnown RBP28.85■■■□□ 2.21
RAB40C-211ENST00000568586 MSH3P20585 1137 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 CSTF2P33240 577 aaKnown RBP eCLIP28.85■■■□□ 2.21
RAB40C-211ENST00000568586 MAPK10P53779 464 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 CXADRP78310 365 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 CLCA4Q14CN2 919 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 BCL7AQ4VC05 210 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 TMEM164Q5U3C3 297 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 METRNLQ641Q3 311 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 DTX1Q86Y01 620 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 NCSTNQ92542 709 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms