RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 GZMAP12544 262 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 VCLP18206 1134 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 IDSP22304 550 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 IL4RP24394 825 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ELAVL4P26378 380 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ARL4DP49703 201 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 DRG2P55039 364 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 PPP1CAP62136 330 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 GALNT2Q10471 571 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 KRT81Q14533 505 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 NR6A1Q15406 480 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ZRANB3Q5FWF4 1079 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 IZUMO3Q5VZ72 239 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ALS2CLQ60I27 953 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF517Q6ZMY9 492 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 TMEM126BQ8IUX1 230 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 TRAM1L1Q8N609 369 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 RBMXL3Q8N7X1 1067 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ADAMTS17Q8TE56 1095 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 FATE1Q969F0 183 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 TRIM11Q96F44 468 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 CD180Q99467 661 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 NUP85Q9BW27 656 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 NUDT9Q9BW91 350 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ADGRE3Q9BY15 652 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ZFYVE1Q9HBF4 777 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 RAD18Q9NS91 495 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 FANCLQ9NW38 375 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 GPR83Q9NYM4 423 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 NFKBIL1Q9UBC1 381 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 MYO6Q9UM54 1294 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 SNX7Q9UNH6 387 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF106Q9H2Y7 1883 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 TNRC6AQ8NDV7 1962 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 TLCD2A6NGC4 264 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 SCRG1O75711 98 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 CDK14O94921 469 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 HLA-DQB2P05538 268 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 KLK3P07288 261 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 MYBL1P10243 752 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 FECHP22830 423 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 HALP42357 657 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 TUBB4BP68371 445 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 HSD11B2P80365 405 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 NIPAL4Q0D2K0 466 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 GPS2Q13227 327 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 TUBB2AQ13885 445 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 PIGHQ14442 188 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 IFI16Q16666 785 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 C1QL3Q5VWW1 255 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 TXNRD3NBQ6F5E7 133 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF547Q8IVP9 402 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 IQCKQ8N0W5 287 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 TMEM102Q8N9M5 508 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 GPR26Q8NDV2 337 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 OR8K5Q8NH50 307 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 EID2BQ96D98 161 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 TSGA13Q96PP4 275 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 SMAD5Q99717 465 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 MAP3K3Q99759 626 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 TUBB2BQ9BVA1 445 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 CHST8Q9H2A9 424 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 DTLQ9NZJ0 730 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 MYO1AQ9UBC5 1043 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 TRIM10Q9UDY6 481 aa11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 LIMA1Q9UHB6 759 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-209ENST00000568569 C2CD3Q4AC94 2353 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 A6NL46 340 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF185O15231 689 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 KRT86O43790 486 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 MTX2O75431 263 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 CBX6O95503 412 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 SLC4A1P02730 911 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 RAB40ALP0C0E4 278 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 CCNCP24863 283 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 CD86P42081 329 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 VAV2P52735 878 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 RRADP55042 308 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 GSDMDP57764 484 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 SLC25A11Q02978 314 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 MMRN1Q13201 1228 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 PAFAH1B3Q15102 231 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 NCBP2-AS2Q69YL0 99 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 MED25Q71SY5 747 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 TRAPPC5Q8IUR0 188 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 D2HGDHQ8N465 521 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 ENDOVQ8N8Q3 282 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 GLIS1Q8NBF1 620 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 TTC13Q8NBP0 860 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 SNRNP40Q96DI7 357 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 C19orf60Q96EN9 201 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 LRFN5Q96NI6 719 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 PHF12Q96QT6 1004 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 NLNQ9BYT8 704 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 HAUS4Q9H6D7 363 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 LATS2Q9NRM7 1088 aa11.55□□□□□ -0.56
GTF3C1-209ENST00000568569 KCND1Q9NSA2 647 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms