RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 CTC1Q2NKJ3 1217 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 UNC50Q53HI1 259 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ACSBG2Q5FVE4 666 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 FBXW10Q5XX13 1052 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 CLEC6AQ6EIG7 209 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 EPGNQ6UW88 154 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 FRMD7Q6ZUT3 714 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ACAD11Q709F0 780 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 AFAP1L2Q8N4X5 818 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ZBTB2Q8N680 514 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 CSGALNACT1Q8TDX6 532 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 PPP1R16AQ96I34 528 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 NSL1Q96IY1 281 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 PANX3Q96QZ0 392 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 STN1Q9H668 368 aaKnown RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 MID1IP1Q9NPA3 183 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 SPATS2LQ9NUQ6 558 aaKnown RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 PPM1HQ9ULR3 514 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 TNRC18O15417 2968 aaPredicted RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 MYO10Q9HD67 2058 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 SLCO1B7G3V0H7 640 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 GRID2O43424 1007 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 DCXO43602 365 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 LZTS3O60299 673 aaPredicted RBP6.97□□□□□ -1.29
SMG1-215ENST00000568239 CRCPO75575 148 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 OR56A5P0C7T3 313 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TIE1P35590 1138 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 MMP12P39900 470 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 GRIA2P42262 883 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 B4GALNT1Q00973 533 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 RALGDSQ12967 914 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TGFBIQ15582 683 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TTLL9Q3SXZ7 439 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 LIPIQ6XZB0 460 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 DPPA4Q7L190 304 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TREML1Q86YW5 311 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 BEND7Q8N7W2 519 aaPredicted RBP6.97□□□□□ -1.29
SMG1-215ENST00000568239 ZNF513Q8N8E2 541 aaPredicted RBP6.97□□□□□ -1.29
SMG1-215ENST00000568239 DCBLD1Q8N8Z6 715 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 KDM1BQ8NB78 822 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 ARRDC3Q96B67 414 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 ULK4Q96C45 1275 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 FAM129BQ96TA1 746 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 EGFL8Q99944 293 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TMEM245Q9H330 911 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 GSTO2Q9H4Y5 243 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TNFRSF12AQ9NP84 129 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 SAR1AQ9NR31 198 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.97□□□□□ -1.29
SMG1-215ENST00000568239 DKK3Q9UBP4 350 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 VTI1BQ9UEU0 232 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 MBD1Q9UIS9 605 aaPredicted RBP6.97□□□□□ -1.29
SMG1-215ENST00000568239 CDYLQ9Y232 598 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 NUMA1Q14980 2115 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TRPM6Q9BX84 2022 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 LOC100653049A0A140TA62 436 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 ATP6AP2A0A1C7CYW4 349 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 CFAP99D6REC4 459 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 C1QTNF3-AMACRE9PGA6 284 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 UBFD1O14562 309 aaKnown RBP6.97□□□□□ -1.29
SMG1-215ENST00000568239 WNT9AO14904 365 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 GIPC1O14908 333 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 MMP20O60882 483 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 ATP6AP2O75787 350 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 KRT34O76011 436 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 S100BP04271 92 aaPredicted RBP6.97□□□□□ -1.29
SMG1-215ENST00000568239 ADRB3P13945 408 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 ATP1B2P14415 290 aaPredicted RBP6.97□□□□□ -1.29
SMG1-215ENST00000568239 NQO1P15559 274 aaKnown RBP6.97□□□□□ -1.29
SMG1-215ENST00000568239 ITGB7P26010 798 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 SERPINB5P36952 375 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 MTHFRP42898 656 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TUBB3Q13509 450 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 C2orf27AQ580R0 203 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 ANKS6Q68DC2 871 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 MACC1Q6ZN28 852 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 DSG4Q86SJ6 1040 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 POU5F2Q8N7G0 328 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 L3HYPDHQ96EM0 354 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 MARK4Q96L34 752 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 C19orf43Q9BQ61 176 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TUBB6Q9BUF5 446 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 SLC40A1Q9NP59 571 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 PRSS16Q9NQE7 514 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 SUN2Q9UH99 717 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 TMPRSS11EQ9UL52 423 aa6.97□□□□□ -1.29
SMG1-215ENST00000568239 CCDC189A1A4V9 331 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 TSPAN11A1L157 253 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 CFAP73A6NFT4 308 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 AGAP14A8MT82 685 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 FADS2P1A8MWK0 482 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 GYG2O15488 501 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 SYNCRIPO60506 623 aaKnown RBP6.96□□□□□ -1.29
SMG1-215ENST00000568239 KRT16P08779 473 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 ALOX15P16050 662 aaPredicted RBP6.96□□□□□ -1.29
SMG1-215ENST00000568239 CD9P21926 228 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 CALB2P22676 271 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 CCR7P32248 378 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 LTBRP36941 435 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 GALK1P51570 392 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms